Sodium in PDB 1kvt: Udp-Galactose 4-Epimerase Complexed with Udp-Phenol

All present enzymatic activity of Udp-Galactose 4-Epimerase Complexed with Udp-Phenol:
5.1.3.2;

The structure of Udp-Galactose 4-Epimerase Complexed with Udp-Phenol, PDB code: 1kvt was solved by J.B.Thoden, A.M.Gulick, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.15
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	83.500, 83.500, 108.400, 90.00, 90.00, 120.00
R / Rfree (%)	n/a / n/a

The binding sites of Sodium atom in the Udp-Galactose 4-Epimerase Complexed with Udp-Phenol (pdb code 1kvt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Udp-Galactose 4-Epimerase Complexed with Udp-Phenol, PDB code: 1kvt:

Sodium binding site 1 out of 1 in the Udp-Galactose 4-Epimerase Complexed with Udp-Phenol


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Udp-Galactose 4-Epimerase Complexed with Udp-Phenol within 5.0Å range: probe atom residue distance (Å) B Occ A:Na412 b:23.4 occ:1.00 O A:HOH492 2.1 43.5 1.0 O A:HOH493 2.2 38.3 1.0 OE1 A:GLN91 2.3 37.1 1.0 O A:HOH494 2.6 39.8 1.0 O A:HOH491 2.9 39.0 1.0 CD A:GLN91 3.2 32.9 1.0 O A:HOH496 3.3 67.5 1.0 O A:HOH495 3.4 61.6 1.0 NE2 A:GLN91 3.5 42.6 1.0 CG A:GLN91 4.5 41.2 1.0 CA A:GLN91 4.6 36.7 1.0 CB A:GLN91 4.8 21.4 1.0

J.B.Thoden, A.M.Gulick, H.M.Holden. Molecular Structures of the S124A, S124T, and S124V Site-Directed Mutants of Udp-Galactose 4-Epimerase From Escherichia Coli. Biochemistry V. 36 10685 1997.
ISSN: ISSN 0006-2960
PubMed: 9271499
DOI: 10.1021/BI9704313