Sodium in PDB 1g5u: Latex Profilin HEVB8

The structure of Latex Profilin HEVB8, PDB code: 1g5u was solved by A.A.Fedorov, E.V.Fedorov, E.Ganglberger, H.Breiteneder, S.C.Almo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.30 / 3.10
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	58.877, 58.877, 83.469, 90.00, 90.00, 120.00
R / Rfree (%)	25.9 / 31.3

The binding sites of Sodium atom in the Latex Profilin HEVB8 (pdb code 1g5u). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Latex Profilin HEVB8, PDB code: 1g5u:

Sodium binding site 1 out of 1 in the Latex Profilin HEVB8


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Latex Profilin HEVB8 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na6001 b:34.9 occ:1.00 OD2 A:ASP1124 2.9 44.4 1.0 OD2 B:ASP2124 3.0 44.5 1.0 CA A:ARG1121 3.9 43.5 1.0 CG A:ASP1124 3.9 45.1 1.0 CG B:ASP2124 4.0 45.5 1.0 CA B:ARG2121 4.0 44.1 1.0 O A:GLU1120 4.1 39.6 1.0 OD1 A:ASP1124 4.1 47.9 1.0 N A:ARG1121 4.2 42.9 1.0 OD1 B:ASP2124 4.2 48.0 1.0 C A:GLU1120 4.3 41.3 1.0 O B:GLU2120 4.3 40.7 1.0 N B:ARG2121 4.3 43.7 1.0 O A:MET1117 4.4 37.0 1.0 C B:GLU2120 4.5 42.1 1.0 O B:MET2117 4.5 37.8 1.0 CB A:ARG1121 4.7 43.9 1.0 O A:ARG1121 4.8 43.5 1.0 CB B:ARG2121 4.8 44.3 1.0 C A:ARG1121 4.9 43.7 1.0 CB A:GLU1120 4.9 43.6 1.0 O B:ARG2121 4.9 44.2 1.0 CG A:ARG1121 5.0 45.3 1.0

A.A.Fedorov, E.V.Fedorov, E.Ganglberger, H.Breiteneder, S.C.Almo. A Comparative Structural Analysis of Allergen Profilins HEVB8 and BETV2 To Be Published.