Sodium in PDB 1fy7: Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A

The structure of Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A, PDB code: 1fy7 was solved by Y.Yan, N.A.Barlev, R.H.Haley, S.L.Berger, R.Marmorstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.00
Space group	I 41 3 2
Cell size a, b, c (Å), α, β, γ (°)	181.500, 181.500, 181.500, 90.00, 90.00, 90.00
R / Rfree (%)	21.9 / 23.6

The binding sites of Sodium atom in the Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A (pdb code 1fy7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A, PDB code: 1fy7:

Sodium binding site 1 out of 1 in the Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Yeast ESA1 Histone Acetyltransferase Domain Complexed with Coenzyme A within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1 b:12.6 occ:1.00 S1P A:COA500 2.7 46.8 1.0 O A:ALA303 3.1 21.1 1.0 C2P A:COA500 3.2 34.0 1.0 CA A:CYS304 3.8 21.7 1.0 C A:ALA303 4.1 19.9 1.0 N A:ILE305 4.1 19.3 1.0 C3P A:COA500 4.1 31.4 1.0 CG2 A:ILE305 4.3 20.0 1.0 C A:CYS304 4.3 19.7 1.0 N A:CYS304 4.4 19.7 1.0 O A:GLU338 4.5 17.1 1.0 CG A:LEU341 4.7 25.1 1.0 CB A:CYS304 4.9 24.7 1.0 SG A:CYS304 4.9 36.0 1.0 CG1 A:VAL302 5.0 16.6 1.0

Y.Yan, N.A.Barlev, R.H.Haley, S.L.Berger, R.Marmorstein. Crystal Structure of Yeast ESA1 Suggests A Unified Mechanism For Catalysis and Substrate Binding By Histone Acetyltransferases. Mol.Cell V. 6 1195 2000.
ISSN: ISSN 1097-2765
PubMed: 11106757
DOI: 10.1016/S1097-2765(00)00116-7