Sodium »
PDB 1c8v-1de7 »
1d3a »
Sodium in PDB 1d3a: Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form
Enzymatic activity of Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form
All present enzymatic activity of Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form:
1.1.1.37;
1.1.1.37;
Protein crystallography data
The structure of Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form, PDB code: 1d3a
was solved by
S.B.Richard,
D.Madern,
E.Garcin,
G.Zaccai,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 30.00 / 2.94 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 115.780, 131.330, 125.450, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.2 / 24.4 |
Other elements in 1d3a:
The structure of Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form also contains other interesting chemical elements:
| Chlorine | (Cl) | 2 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form
(pdb code 1d3a). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form, PDB code: 1d3a:
In total only one binding site of Sodium was determined in the Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form, PDB code: 1d3a:
Sodium binding site 1 out of 1 in 1d3a
Go back to
Sodium Binding Sites List in 1d3a
Sodium binding site 1 out
of 1 in the Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of the Wild Type Halophilic Malate Dehydrogenase in the Apo Form within 5.0Å range:
|
Reference:
S.B.Richard,
D.Madern,
E.Garcin,
G.Zaccai.
Halophilic Adaptation: Novel Solvent Protein Interactions Observed in the 2.9 and 2.6 A Resolution Structures of the Wild Type and A Mutant of Malate Dehydrogenase From Haloarcula Marismortui. Biochemistry V. 39 992 2000.
ISSN: ISSN 0006-2960
PubMed: 10653643
DOI: 10.1021/BI991001A
Page generated: Sun Oct 6 18:01:52 2024
ISSN: ISSN 0006-2960
PubMed: 10653643
DOI: 10.1021/BI991001A
Last articles
Fe in 2YXOFe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
