Sodium in PDB, part 286 (files: 11401-11440),
PDB 8j2h-8k7w
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11401-11440 (PDB 8j2h-8k7w).
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8j2h (Na: 2) - Crystal Structure of A Bright Green Fluorescent Protein (Staygold) with Single Mutation (N137A) in Jellyfish Cytaeis Uchidae From Biortus
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8j2l (Na: 2) - Crystal Structure of A Bright Green Fluorescent Protein (Staygold) with Double Mutations (N137A, Y187F) in Jellyfish Cytaeis Uchidae From Biortus
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8j5a (Na: 1) - Single-Particle Cryo-Em Structure of Mouse Apoferritin at 1.19 Angstrom Resolution (Dataset A)
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8j6g (Na: 1) - Neutron Structure of Copper Amine Oxidase From Arthrobacter Globiformis Anaerobically Reduced By Phenylethylamine at Pd 9.0
Other atoms:
Cu (1);
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8j6m (Na: 1) - SIDT1 Protein
Other atoms:
Zn (2);
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8j98 (Na: 2) - A Near-Infrared Fluorescent Protein of De Novo Backbone Design
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8j9c (Na: 5) - Crystal Structure of M61 Peptidase (Apo-Form) From Xanthomonas Campestris
Other atoms:
Zn (4);
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8jbk (Na: 8) - Crystal Structure of Na+,K+-Atpase in the E1.3NA+ State
Other atoms:
Mn (2);
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8jc1 (Na: 8) - Crystal Structure of Pectocin M1 From Pectobacterium Carotovorum
Other atoms:
Mg (4);
Fe (8);
Cl (2);
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8jew (Na: 2) - Human Sodium-Dependent Vitamin C Transporter 1 Bound to L-Ascorbic Acid in An Inward-Open State
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8jfs (Na: 3) - Phosphate Bound Acylphosphatase From Deinococcus Radiodurans at 1 Angstrom Resolution
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8jgu (Na: 1) - Crystal Structure of N-Terminal Domain of Exopolyphosphatase From Deinococcus Radiodurans
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8jjm (Na: 2) - X-Ray Crystal Structure of A Multifunctional Enzyme (AMY63) From Vibrio Alginolyticus 63
Other atoms:
Ca (6);
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8jnc (Na: 1) - Crystal Structure of Cytochrome P450 Ikad From Streptomyces Sp. ZJ306, in Complex with the Substrate 10-Epi-Maltophilin
Other atoms:
Fe (2);
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8jno (Na: 1) - Crystal Structure of Cytochrome P450 Ikad From Streptomyces Sp. ZJ306, in Complex with the Substrate 10-Epi-Deoh-Hsaf
Other atoms:
Fe (2);
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8jnq (Na: 1) - Crystal Structure of Cytochrome P450 Cfta From Streptomyces Torulosus Nrrl B-3889, in Complex with A Substrate Compound C
Other atoms:
Fe (1);
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8joo (Na: 1) - Crystal Structure of Cytochrome P450 Ikad From Streptomyces Sp. ZJ306, in Complex with the Substrate Ikarugamycin
Other atoms:
Fe (2);
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8jsu (Na: 2) - The Crystal Structure of Tvae in Complex with Tvalp
Other atoms:
Cl (1);
Br (3);
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8jto (Na: 2) - Outer Membrane Porin of Burkholderia Pseudomallei (BPSOMP38) in Complex with Ceftazidime
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8juq (Na: 18) - Crystal Structure of Chitoporin From Vibrio Harveyi in Complex with Gentamicin C1A
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8jur (Na: 8) - Crystal Structure of Chitoporin From Vibrio Harveyi in Complex with Gentamicin C1A (Multiple Binding Sites)
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8jwy (Na: 1) - Crystal Structure of A2AR-T4L in Complex with 2-118
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8jwz (Na: 1) - Crystal Structure of A2AR-T4L in Complex with AB928
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8jzh (Na: 3) - C. Glutamicum S-Adenosylmethionine Synthase
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8jzi (Na: 4) - Mutant S-Adenosylmethionine Synthase From C. Glutamicum
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8k0t (Na: 1) - Crystal Structure of Theophylline Dna Aptamer Bound to Theophylline
Other atoms:
K (1);
I (1);
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8k0u (Na: 4) - Crystal Structure of Theophylline Dna Aptamer Bound to Hypoxanthine
Other atoms:
K (1);
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8k0v (Na: 4) - Crystal Structure of Theophylline Dna Aptamer Bound to 3- Methylxanthine
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8k0w (Na: 5) - Crystal Structure of Theophylline Dna Aptamer Bound to Theophylline, Soaked in Selenourea
Other atoms:
Mg (1);
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8k0y (Na: 13) - Crystal Structure of A Medaka Mascrna U23G
Other atoms:
Ir (7);
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8k1e (Na: 7) - Crystal Structure of A Human Menrna
Other atoms:
K (5);
Mg (4);
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8k1k (Na: 1) - Ktra Bound with Atp and Sodium
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8k1t (Na: 4) - Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of MGCL2
Other atoms:
K (4);
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8k1u (Na: 4) - Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta
Other atoms:
K (4);
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8k2z (Na: 12) - Crystal Structure of A Human Mascrna A2G
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8k30 (Na: 11) - Crystal Structure of A Medaka Mascrna U23G
Other atoms:
Sr (2);
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8k4r (Na: 2) - Structure of Vinm-Vinl Complex
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8k66 (Na: 4) - Cryo-Em Structure of Oryza Sativa HKT2;1 at 2.5 Angstrom
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8k69 (Na: 6) - Cryo-Em Structure of Oryza Sativa HKT2;2/1 at 2.3 Angstrom
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8k7w (Na: 2) - Crystal Structure of Broccoli Aptamer with Dfhbi-1T
Other atoms:
K (3);
F (5);
Page generated: Mon Dec 15 11:18:05 2025
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