Sodium in PDB, part 268 (files: 10681-10720),
PDB 7wzv-7y44
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10681-10720 (PDB 7wzv-7y44).
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7wzv (Na: 5) - The Structure of A Twitch Radical Sam Dehydrogenase Spey
Other atoms:
Cl (1);
Fe (16);
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7x0b (Na: 1) - The Structure of A Twitch Radical Sam Dehydrogenase Spey
Other atoms:
Cl (6);
Fe (16);
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7x23 (Na: 3) - Cryo-Em Structure of Non Gastric H,K-Atpase ALPHA2 Spwc Mutant in 3NA+E1-Amppcpf State
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7x5p (Na: 16) - Truncated Vhchip (1-19AA) in Complex with Doxycycline
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7x5q (Na: 16) - Apo Truncated Vhchip (Delta 1-19) in Complex with Peptide (Dgansdaak)
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7x68 (Na: 1) - CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone
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7x8c (Na: 3) - Crystal Structure of A Ktsc Family Protein From Euryarchaeon Methanolobus Vulcani
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7x9h (Na: 1) - Crystal Structure of Mutt-8-Oxo-Dgtp Complex: Reaction For 9 Hr Using 5 Mm MN2+
Other atoms:
Mn (3);
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7x9i (Na: 1) - Crystal Structure of Mutt-8-Oxo-Dgtp Complex: Reaction For 12 Hr Using 5 Mm MN2+
Other atoms:
Mn (3);
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7x9j (Na: 1) - Crystal Structure of Mutt-8-Oxo-Dgtp Complex: Reaction For 24 Hr Using 5 Mm MN2+
Other atoms:
Mn (1);
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7x9k (Na: 1) - Crystal Structure of Mutt-8-Oxo-Dgtp Complex: Reaction For 2 Hr Using 10 Mm MN2+
Other atoms:
Mn (3);
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7x9l (Na: 1) - Crystal Structure of Mutt-8-Oxo-Dgtp Complex: Reaction For 4 Hr Using 10 Mm MN2+
Other atoms:
Mn (1);
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7xbe (Na: 2) - Co-Crystal Structure of Ccpe-Rd with Citrate
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7xcl (Na: 6) - Crystal Structure of Trimethylamine Methyltransferase Mttb From Methanosarcina Barkeri at 2.5 A Resolution
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7xcm (Na: 6) - Crystal Structure of Sulfite Mttb Structure at 3.2 A Resolution
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7xe5 (Na: 1) - T4 Lysozyme Mutant-S44C/C54T/N68C/A93C/C97A/T115C, PH4
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7xe6 (Na: 3) - T4 Lysozyme Mutant-S44C/C54T/N68C/A93C/C97A/T115C, PH7
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7xe9 (Na: 1) - T4 Lysozyme Mutant-S44C/C54T/N68C/A93C/C97A/T115C, Dmso 20%
Other atoms:
Cl (1);
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7xea (Na: 4) - T4 Lysozyme Mutant-S44C/C54T/N68C/A93C/C97A/T115C, Dmso 40%, and Then Backsoaking
Other atoms:
Cl (2);
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7xee (Na: 3) - Crystal Structure of the Y53F/N55A Mutant of Leh Complexed with 2-(3- Phenyloxetan-3-Yl)Ethanamine
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7xef (Na: 6) - Crystal Structure of the Y53F/N55A Mutant of Leh Complexed with (R)- (1-Benzyl-3-Phenylpyrrolidin-3-Yl)Methanol
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7xft (Na: 5) - Mucp PDZ2 Domain
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7xjb (Na: 1) - Rat-Comt, Opicapone,Sam and Mg Bond
Other atoms:
Mg (4);
Cl (13);
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7xjv (Na: 5) - Crystal Structure of Alpha-1,3-Mannosyltransferase MNT2 From Saccharomyces Cerevisiae, Mn/Gdp-Mannose Form
Other atoms:
Mn (4);
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7xk9 (Na: 1) - Structure of Human BETA2 Adrenergic Receptor Bound to Constrained Isoproterenol
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7xka (Na: 1) - Structure of Human BETA2 Adrenergic Receptor Bound to Constrained Epinephrine
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7xld (Na: 1) - Crystal Structure of Isdh Linker-NEAT3 Bound to A Nanobody (Vhh)
Other atoms:
Mg (1);
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7xma (Na: 2) - Crystal Structure of Bovine Heart Cytochrome C Oxidase, Apo Structure with Dmso
Other atoms:
Fe (4);
Zn (2);
Cu (6);
Mg (2);
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7xmb (Na: 2) - Crystal Structure of Bovine Heart Cytochrome C Oxidase, the Structure Complexed with An Allosteric Inhibitor T113
Other atoms:
Mg (2);
Fe (4);
Cu (6);
Zn (2);
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7xoi (Na: 8) - Aspergillus Sojae Alpha-Glucosidase Asojagdl in Complex with Trehalose
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7xq7 (Na: 1) - The Complex Structure of Wt-Mpro
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7xsf (Na: 2) - Crystal Structure of CLAGL29A
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7xsg (Na: 2) - Crystal Structure of CLAGL29B
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7xsh (Na: 2) - Crystal Structure of CLAGL29B Bound with L-Glucose
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7xts (Na: 2) - The Apo Structure of the Engineered Tfcut S130A
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7xtt (Na: 2) - The Structure of Engineered Tfcut S130A in Complex with Mhet
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7xu8 (Na: 1) - Structure of the Complex of Camel Peptidoglycan Recognition Protein- Short (Pgrp-S) with Heptanoic Acid at 2.15 A Resolution.
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7xxk (Na: 2) - Crystal Structure of Sars-Cov-2 N-Ctd in Complex with Gmp
Other atoms:
K (9);
Cl (13);
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7xyr (Na: 9) - Cystal Structure of Beta-Glucuronidase From Bacteroides Thetaiotaomicron
Other atoms:
Mg (22);
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7y44 (Na: 4) - Re-Refinement of Damage Free X-Ray Structure of Bovine Cytochrome C Oxidase at 1.9 Angstrom Resolution
Other atoms:
Cu (6);
Zn (2);
Fe (4);
Mg (2);
Page generated: Tue Feb 25 11:41:25 2025
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