Sodium in PDB, part 255 (files: 10161-10200),
PDB 7mzb-7npi
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10161-10200 (PDB 7mzb-7npi).
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7mzb (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 3 Bound Rtx and 1 Perturbed Pi
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7mzc (Na: 2) - Cryo-Em Structure of Minimal TRPV1 with Rtx Bound in C1 State
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7mzd (Na: 2) - Cryo-Em Structure of Minimal TRPV1 with Rtx Bound in C2 State
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7mze (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 2 Bound Rtx in Opposite Pockets
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7n16 (Na: 1) - Structure of Tax-4_R421W Apo Closed State
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7n27 (Na: 2) - Crystal Structure of Chromodomain of Cdyl in Complex with Inhibitor UNC6261
Other atoms:
F (30);
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7n4k (Na: 4) - 6218 Tcr in Complex with H2-Db Pa 224
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7n4p (Na: 3) - Crystal Structure of Lizard Cadherin-23 EC1-2
Other atoms:
Ca (6);
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7n5c (Na: 1) - 6218 Tcr in Complex with H2DB Pa with An Engineered Tcr-Pmhc Disulfide Bond
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7n5p (Na: 4) - 6218 Tcr in Complex with H2-Db PA224-233 with A Cysteine Mutant
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7n5q (Na: 11) - Peptide-Mhc Complex of Mouse H2-Db Presenting PA224 with E4C Mutation
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7n7h (Na: 1) - X-Ray Crystal Structure of Viperin-Like Enzyme From Nematostella Vectensis
Other atoms:
Fe (4);
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7n86 (Na: 2) - Crystal Structure of Human Protocadherin-24 EC1-2 Form II
Other atoms:
Ca (14);
Cl (6);
I (1);
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7nab (Na: 16) - Crystal Structure of Human Neutralizing Mab CV3-25 Binding to Sars- Cov-2 S Mper Peptide 1140-1165
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7nam (Na: 2) - LRP6_E1 in Complex with Lr-Eet-3.5
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7nbb (Na: 2) - Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Synthetic Nanobody NBSL3
Other atoms:
Mg (7);
Cl (7);
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7nby (Na: 1) - Crystal Structure of SU3327 (Halicin) Covalently Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
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7ncd (Na: 1) - Glutathione-S-Transferase Glig Mutant N27D
Other atoms:
Cl (1);
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7ncp (Na: 3) - Glutathione-S-Transferase Glig Mutant K127A
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7ncv (Na: 2) - Crystal Structure of Reduced Glutaredoxin 2 From Chlamydomonas Reinhardtii
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7ndh (Na: 1) - Crystal Structure of ZC3H12C Pin Domain
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7ndi (Na: 3) - Crystal Structure of ZC3H12C Pin Domain with MG2+ Ion
Other atoms:
Mg (4);
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7ndj (Na: 2) - Crystal Structure of ZC3H12C Pin-Ccch Zn Finger Domain with Rna Heptamer
Other atoms:
Zn (1);
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7ndk (Na: 2) - Crystal Structure of ZC3H12C Pin Catalytic Mutant
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7ndm (Na: 3) - Crystal Structure of the Heterocyclic Toxin Methyltransferase From Mycobacterium Tuberculosis with Bound Substrate 4-Hydroxyisoquinolin- 1(2H)-One
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7nea (Na: 3) - Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).
Other atoms:
Cl (3);
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7neb (Na: 1) - Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M4 Mutant)
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7nei (Na: 2) - Novel Polyester Hydrolase Leipzig 7 (Phl-7)
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7nel (Na: 1) - Er-Prs*(+) (Y537S) in Complex with Estradiol and Src-2 Coactivator Peptide
Other atoms:
Cl (1);
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7neu (Na: 1) - Inhibitor Complex with Thrombin Activatable Fibrinolysis Inhibitor (Tafia)
Other atoms:
Zn (1);
Cl (1);
F (1);
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7nf5 (Na: 1) - Crystal Structure of Mg-132 Covalently Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 in Spacegroup C2.
Other atoms:
Cl (2);
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7nfb (Na: 3) - Er-Prs*(+) (Y537S) in Complex with Genistein and Src-2 Coactivator Peptide
Other atoms:
Cl (3);
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7nge (Na: 1) - Crystal Structure of L-Trp/Indoleamine 2,3-Dioxygenagse 1 (HIDO1) Complex with the Jk-Loop Refined in the Closed Conformation
Other atoms:
Cl (1);
Fe (4);
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7njf (Na: 1) - Hen Egg White Lysozyme (Hewl) Grown Inside Hare Serial Crystallography Chip
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7nkf (Na: 1) - Hen Egg White Lysozyme (Hewl) Grown Inside (Not Centrifuged) Hare Serial Crystallography Chip.
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7nmk (Na: 2) - Crystal Structure of the Heterocyclic Toxin Methyltransferase From Mycobacterium Tuberculosis with Bound Methylation Product 1- Methoxyquinolin-4(1H)-One
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7now (Na: 2) - Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution
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7nox (Na: 3) - Structure of Sgbp BO2743 From Bacteroides Ovatus in Complex with Mixed-Linked Gluco-Nonasaccharide
Other atoms:
Mg (2);
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7noy (Na: 3) - Crystal Structure of the Heterocyclic Toxin Methyltransferase From Mycobacterium Tuberculosis in Complex with Substrate 1- Hydroxyquinolin-4(1H)-One
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7npi (Na: 2) - Crystal Structure of MINDY2 (C266A) in Complex with LYS48-Linked Penta-Ubiquitin (K48-UB5)
Other atoms:
Cl (2);
Page generated: Tue Feb 25 11:40:56 2025
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