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Sodium in PDB 9vw7: Nad(P)-Dependent Oxidoreductase From Kutzneria Albida

Protein crystallography data

The structure of Nad(P)-Dependent Oxidoreductase From Kutzneria Albida, PDB code: 9vw7 was solved by L.Huang, H.G.Fu, Z.C.Yao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.54 / 2.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 117.395, 117.395, 99.569, 90, 90, 90
R / Rfree (%) 16 / 22.8

Sodium Binding Sites:

The binding sites of Sodium atom in the Nad(P)-Dependent Oxidoreductase From Kutzneria Albida (pdb code 9vw7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Nad(P)-Dependent Oxidoreductase From Kutzneria Albida, PDB code: 9vw7:

Sodium binding site 1 out of 1 in 9vw7

Go back to Sodium Binding Sites List in 9vw7
Sodium binding site 1 out of 1 in the Nad(P)-Dependent Oxidoreductase From Kutzneria Albida


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Nad(P)-Dependent Oxidoreductase From Kutzneria Albida within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na304

b:52.4
occ:1.00
O B:GLY87 4.2 34.5 1.0
O B:ALA86 4.2 44.9 1.0
NH1 B:ARG88 4.3 38.5 1.0
CZ B:ARG88 4.4 37.1 1.0
CG B:ARG88 4.4 41.0 1.0
C B:GLY87 4.4 33.5 1.0
NH2 B:ARG88 4.6 38.9 1.0
CA B:GLY87 4.6 31.1 1.0
O B:HOH424 4.9 43.9 1.0
NE B:ARG88 4.9 35.0 1.0

Reference:

L.Huang, H.G.Fu, D.Q.Song, Z.C.Yao, R.Z.Meng, Z.T.Zhou, L.Y.Yu, Z.Y.Wu. Engineering An Imine Reductase For Enantioselective Synthesis of Atropisomeric Amides To Be Published.
Page generated: Mon Aug 18 17:35:10 2025

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