Sodium in PDB 9oh9: Human Stomatin Complex in Native Membrane Vesicles

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>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Sodium atom in the Human Stomatin Complex in Native Membrane Vesicles (pdb code 9oh9). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 16 binding sites of Sodium where determined in the Human Stomatin Complex in Native Membrane Vesicles, PDB code: 9oh9:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Sodium binding site 1 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:50.0 occ:1.00 O A:GLY120 2.1 100.0 1.0 OD1 A:ASP119 2.1 100.0 1.0 OD1 A:ASP102 2.2 100.0 1.0 O A:ILE103 2.2 100.0 1.0 H A:ILE103 3.0 100.0 1.0 N A:ILE103 3.2 100.0 1.0 C A:GLY120 3.2 100.0 1.0 H A:GLY120 3.2 100.0 1.0 C A:ILE103 3.2 100.0 1.0 N A:GLY120 3.3 100.0 1.0 CG A:ASP119 3.3 100.0 1.0 HB A:ILE103 3.4 100.0 1.0 CG A:ASP102 3.4 100.0 1.0 C A:ASP119 3.6 100.0 1.0 CA A:ILE103 3.6 100.0 1.0 C A:ASP102 3.6 100.0 1.0 HA A:ASP102 3.7 100.0 1.0 CA A:GLY120 3.8 100.0 1.0 HG22 A:VAL121 3.8 100.0 1.0 HE2 A:LYS195 3.8 100.0 1.0 HA A:ASP119 3.9 100.0 1.0 HG23 A:VAL121 4.0 100.0 1.0 CB A:ILE103 4.0 100.0 1.0 OD2 A:ASP119 4.0 100.0 1.0 O A:ASP119 4.0 100.0 1.0 CA A:ASP102 4.1 100.0 1.0 CA A:ASP119 4.1 100.0 1.0 O A:ASP102 4.2 100.0 1.0 OD2 A:ASP102 4.2 100.0 1.0 HZ2 A:LYS195 4.2 100.0 1.0 CB A:ASP119 4.3 100.0 1.0 N A:VAL121 4.3 100.0 1.0 CB A:ASP102 4.3 100.0 1.0 HA A:VAL121 4.4 100.0 1.0 CG2 A:VAL121 4.4 100.0 1.0 HA2 A:GLY120 4.4 100.0 1.0 N A:PRO104 4.4 100.0 1.0 HA3 A:GLY120 4.4 100.0 1.0 HA A:ILE103 4.5 100.0 1.0 HA A:PRO104 4.5 100.0 1.0 HG13 A:ILE103 4.6 100.0 1.0 HB2 A:LYS195 4.6 100.0 1.0 HD3 A:LYS195 4.6 100.0 1.0 CE A:LYS195 4.6 100.0 1.0 O A:HOH412 4.7 50.0 1.0 HB3 A:ASP119 4.7 100.0 1.0 H1 A:HOH412 4.7 50.0 1.0 HZ3 A:LYS195 4.7 100.0 1.0 NZ A:LYS195 4.7 100.0 1.0 HB3 A:LYS195 4.8 100.0 1.0 CA A:VAL121 4.8 100.0 1.0 HB3 A:ASP102 4.8 100.0 1.0 CA A:PRO104 4.8 100.0 1.0 CG1 A:ILE103 4.9 100.0 1.0 C A:PRO104 4.9 100.0 1.0 HG23 A:ILE103 5.0 100.0 1.0

Sodium binding site 2 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ B:Na301 b:50.0 occ:1.00 O B:ILE103 2.1 100.0 1.0 OD1 B:ASP119 2.1 100.0 1.0 OD1 B:ASP102 2.2 100.0 1.0 O B:GLY120 2.3 100.0 1.0 O B:HOH447 3.0 50.0 1.0 H B:ILE103 3.0 100.0 1.0 N B:ILE103 3.1 100.0 1.0 C B:ILE103 3.1 100.0 1.0 HE2 B:LYS195 3.2 100.0 1.0 H B:GLY120 3.2 100.0 1.0 N B:GLY120 3.3 100.0 1.0 CG B:ASP119 3.3 100.0 1.0 C B:GLY120 3.3 100.0 1.0 CG B:ASP102 3.3 100.0 1.0 H1 B:HOH447 3.5 50.0 1.0 HB B:ILE103 3.5 100.0 1.0 C B:ASP102 3.6 100.0 1.0 H2 B:HOH447 3.6 50.0 1.0 CA B:ILE103 3.6 100.0 1.0 C B:ASP119 3.7 100.0 1.0 HA B:ASP102 3.8 100.0 1.0 CA B:GLY120 3.9 100.0 1.0 HA B:ASP119 3.9 100.0 1.0 HG22 B:VAL121 3.9 100.0 1.0 CA B:ASP102 4.1 100.0 1.0 OD2 B:ASP119 4.1 100.0 1.0 OD2 B:ASP102 4.1 100.0 1.0 CE B:LYS195 4.1 100.0 1.0 CB B:ILE103 4.1 100.0 1.0 O B:ASP102 4.1 100.0 1.0 HG2 B:LYS195 4.1 100.0 1.0 CA B:ASP119 4.2 100.0 1.0 HG23 B:VAL121 4.2 100.0 1.0 HZ3 B:LYS195 4.3 100.0 1.0 HD3 B:LYS195 4.3 100.0 1.0 O B:ASP119 4.3 100.0 1.0 CB B:ASP102 4.3 100.0 1.0 N B:PRO104 4.3 100.0 1.0 CB B:ASP119 4.3 100.0 1.0 HA B:PRO104 4.4 100.0 1.0 HA B:ILE103 4.5 100.0 1.0 HA3 B:GLY120 4.5 100.0 1.0 N B:VAL121 4.5 100.0 1.0 HA B:VAL121 4.5 100.0 1.0 CG2 B:VAL121 4.5 100.0 1.0 HA2 B:GLY120 4.5 100.0 1.0 CD B:LYS195 4.6 100.0 1.0 NZ B:LYS195 4.7 100.0 1.0 HG13 B:ILE103 4.7 100.0 1.0 CA B:PRO104 4.7 100.0 1.0 H1 B:HOH402 4.7 50.0 1.0 O B:HOH402 4.7 50.0 1.0 C B:PRO104 4.7 100.0 1.0 HE3 B:LYS195 4.7 100.0 1.0 HD3 B:PRO105 4.8 100.0 1.0 HB3 B:ASP119 4.8 100.0 1.0 HB3 B:ASP102 4.8 100.0 1.0 CG B:LYS195 4.8 100.0 1.0 HZ1 B:LYS195 4.9 100.0 1.0 O B:PRO104 4.9 100.0 1.0 CA B:VAL121 5.0 100.0 1.0 HB2 B:ASP102 5.0 100.0 1.0

Sodium binding site 3 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ C:Na301 b:50.0 occ:1.00 O C:GLY120 2.1 100.0 1.0 OD1 C:ASP119 2.1 100.0 1.0 OD1 C:ASP102 2.2 100.0 1.0 O C:ILE103 2.2 100.0 1.0 H C:ILE103 3.1 100.0 1.0 N C:ILE103 3.2 100.0 1.0 C C:GLY120 3.2 100.0 1.0 C C:ILE103 3.2 100.0 1.0 H C:GLY120 3.2 100.0 1.0 N C:GLY120 3.3 100.0 1.0 CG C:ASP119 3.3 100.0 1.0 HB C:ILE103 3.4 100.0 1.0 CG C:ASP102 3.4 100.0 1.0 C C:ASP119 3.6 100.0 1.0 C C:ASP102 3.6 100.0 1.0 CA C:ILE103 3.6 100.0 1.0 HA C:ASP102 3.7 100.0 1.0 HG22 C:VAL121 3.7 100.0 1.0 CA C:GLY120 3.8 100.0 1.0 HE2 C:LYS195 3.8 100.0 1.0 HA C:ASP119 3.9 100.0 1.0 CB C:ILE103 4.0 100.0 1.0 OD2 C:ASP119 4.0 100.0 1.0 HG23 C:VAL121 4.0 100.0 1.0 O C:ASP119 4.0 100.0 1.0 CA C:ASP102 4.0 100.0 1.0 CA C:ASP119 4.1 100.0 1.0 O C:ASP102 4.2 100.0 1.0 OD2 C:ASP102 4.2 100.0 1.0 CB C:ASP119 4.3 100.0 1.0 HZ2 C:LYS195 4.3 100.0 1.0 N C:VAL121 4.3 100.0 1.0 CB C:ASP102 4.3 100.0 1.0 HA C:VAL121 4.3 100.0 1.0 CG2 C:VAL121 4.3 100.0 1.0 HA2 C:GLY120 4.4 100.0 1.0 N C:PRO104 4.4 100.0 1.0 HA3 C:GLY120 4.4 100.0 1.0 HA C:ILE103 4.5 100.0 1.0 HA C:PRO104 4.5 100.0 1.0 HB2 C:LYS195 4.5 100.0 1.0 HD3 C:LYS195 4.5 100.0 1.0 HG13 C:ILE103 4.6 100.0 1.0 CE C:LYS195 4.6 100.0 1.0 HB3 C:ASP119 4.7 100.0 1.0 O C:HOH406 4.7 50.0 1.0 H1 C:HOH406 4.7 50.0 1.0 NZ C:LYS195 4.8 100.0 1.0 HB3 C:LYS195 4.8 100.0 1.0 HZ3 C:LYS195 4.8 100.0 1.0 CA C:VAL121 4.8 100.0 1.0 CA C:PRO104 4.8 100.0 1.0 HB3 C:ASP102 4.8 100.0 1.0 C C:PRO104 4.9 100.0 1.0 CG1 C:ILE103 4.9 100.0 1.0 HG23 C:ILE103 5.0 100.0 1.0

Sodium binding site 4 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 4 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ D:Na301 b:50.0 occ:1.00 O D:ILE103 2.1 100.0 1.0 OD1 D:ASP119 2.1 100.0 1.0 OD1 D:ASP102 2.2 100.0 1.0 O D:GLY120 2.3 100.0 1.0 O D:HOH436 2.9 50.0 1.0 HE2 D:LYS195 3.0 100.0 1.0 C D:ILE103 3.1 100.0 1.0 H D:ILE103 3.2 100.0 1.0 N D:ILE103 3.2 100.0 1.0 H D:GLY120 3.2 100.0 1.0 CG D:ASP102 3.3 100.0 1.0 H2 D:HOH436 3.3 50.0 1.0 CG D:ASP119 3.3 100.0 1.0 C D:GLY120 3.4 100.0 1.0 N D:GLY120 3.4 100.0 1.0 C D:ASP102 3.5 100.0 1.0 H1 D:HOH436 3.5 50.0 1.0 HB D:ILE103 3.6 100.0 1.0 CA D:ILE103 3.6 100.0 1.0 C D:ASP119 3.7 100.0 1.0 HA D:ASP102 3.8 100.0 1.0 HG22 D:VAL121 3.9 100.0 1.0 CA D:GLY120 3.9 100.0 1.0 HA D:ASP119 3.9 100.0 1.0 OD2 D:ASP102 4.0 100.0 1.0 CE D:LYS195 4.0 100.0 1.0 O D:ASP102 4.0 100.0 1.0 OD2 D:ASP119 4.0 100.0 1.0 CA D:ASP102 4.0 100.0 1.0 HG2 D:LYS195 4.1 100.0 1.0 HG23 D:VAL121 4.1 100.0 1.0 CB D:ILE103 4.1 100.0 1.0 CA D:ASP119 4.2 100.0 1.0 O D:ASP119 4.2 100.0 1.0 CB D:ASP102 4.2 100.0 1.0 HZ3 D:LYS195 4.3 100.0 1.0 N D:PRO104 4.3 100.0 1.0 CB D:ASP119 4.3 100.0 1.0 HD3 D:LYS195 4.3 100.0 1.0 HA D:PRO104 4.4 100.0 1.0 CG2 D:VAL121 4.5 100.0 1.0 HA D:ILE103 4.5 100.0 1.0 N D:VAL121 4.5 100.0 1.0 HA D:VAL121 4.5 100.0 1.0 HA3 D:GLY120 4.5 100.0 1.0 HE3 D:LYS195 4.6 100.0 1.0 HA2 D:GLY120 4.6 100.0 1.0 CD D:LYS195 4.6 100.0 1.0 NZ D:LYS195 4.6 100.0 1.0 CA D:PRO104 4.7 100.0 1.0 C D:PRO104 4.7 100.0 1.0 H1 D:HOH401 4.7 50.0 1.0 O D:HOH401 4.7 50.0 1.0 HB3 D:ASP102 4.7 100.0 1.0 HB3 D:ASP119 4.8 100.0 1.0 HD3 D:PRO105 4.8 100.0 1.0 HG13 D:ILE103 4.8 100.0 1.0 HZ1 D:LYS195 4.8 100.0 1.0 CG D:LYS195 4.8 100.0 1.0 O D:PRO104 4.9 100.0 1.0 HB2 D:ASP102 5.0 100.0 1.0 CA D:VAL121 5.0 100.0 1.0

Sodium binding site 5 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 5 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ E:Na301 b:50.0 occ:1.00 OD1 E:ASP119 2.1 100.0 1.0 O E:GLY120 2.1 100.0 1.0 OD1 E:ASP102 2.2 100.0 1.0 O E:ILE103 2.2 100.0 1.0 H E:ILE103 3.0 100.0 1.0 N E:ILE103 3.2 100.0 1.0 H E:GLY120 3.2 100.0 1.0 C E:GLY120 3.2 100.0 1.0 C E:ILE103 3.2 100.0 1.0 N E:GLY120 3.3 100.0 1.0 CG E:ASP119 3.3 100.0 1.0 HB E:ILE103 3.4 100.0 1.0 CG E:ASP102 3.4 100.0 1.0 C E:ASP119 3.6 100.0 1.0 CA E:ILE103 3.6 100.0 1.0 C E:ASP102 3.6 100.0 1.0 HA E:ASP102 3.7 100.0 1.0 CA E:GLY120 3.8 100.0 1.0 HE2 E:LYS195 3.8 100.0 1.0 HG22 E:VAL121 3.8 100.0 1.0 HA E:ASP119 3.9 100.0 1.0 CB E:ILE103 4.0 100.0 1.0 HG23 E:VAL121 4.0 100.0 1.0 O E:ASP119 4.0 100.0 1.0 OD2 E:ASP119 4.1 100.0 1.0 CA E:ASP102 4.1 100.0 1.0 CA E:ASP119 4.1 100.0 1.0 O E:ASP102 4.2 100.0 1.0 OD2 E:ASP102 4.2 100.0 1.0 CB E:ASP119 4.3 100.0 1.0 HZ2 E:LYS195 4.3 100.0 1.0 CB E:ASP102 4.3 100.0 1.0 N E:VAL121 4.3 100.0 1.0 HA E:VAL121 4.4 100.0 1.0 HA2 E:GLY120 4.4 100.0 1.0 CG2 E:VAL121 4.4 100.0 1.0 N E:PRO104 4.4 100.0 1.0 HA3 E:GLY120 4.4 100.0 1.0 HA E:ILE103 4.5 100.0 1.0 HA E:PRO104 4.5 100.0 1.0 HG13 E:ILE103 4.6 100.0 1.0 HB2 E:LYS195 4.6 100.0 1.0 HD3 E:LYS195 4.6 100.0 1.0 CE E:LYS195 4.6 100.0 1.0 O E:HOH411 4.7 50.0 1.0 HB3 E:ASP119 4.7 100.0 1.0 H1 E:HOH411 4.7 50.0 1.0 HB3 E:LYS195 4.7 100.0 1.0 NZ E:LYS195 4.8 100.0 1.0 HZ3 E:LYS195 4.8 100.0 1.0 CA E:PRO104 4.8 100.0 1.0 CA E:VAL121 4.8 100.0 1.0 HB3 E:ASP102 4.8 100.0 1.0 C E:PRO104 4.9 100.0 1.0 CG1 E:ILE103 4.9 100.0 1.0 HG23 E:ILE103 5.0 100.0 1.0

Sodium binding site 6 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 6 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ F:Na301 b:50.0 occ:1.00 O F:ILE103 2.1 100.0 1.0 OD1 F:ASP119 2.1 100.0 1.0 OD1 F:ASP102 2.2 100.0 1.0 O F:GLY120 2.2 100.0 1.0 O F:HOH446 2.9 50.0 1.0 HE2 F:LYS195 3.1 100.0 1.0 H F:ILE103 3.1 100.0 1.0 C F:ILE103 3.1 100.0 1.0 N F:ILE103 3.2 100.0 1.0 H F:GLY120 3.2 100.0 1.0 C F:GLY120 3.3 100.0 1.0 N F:GLY120 3.3 100.0 1.0 CG F:ASP102 3.3 100.0 1.0 CG F:ASP119 3.3 100.0 1.0 H1 F:HOH446 3.4 50.0 1.0 HB F:ILE103 3.5 100.0 1.0 C F:ASP102 3.5 100.0 1.0 H2 F:HOH446 3.6 50.0 1.0 CA F:ILE103 3.6 100.0 1.0 C F:ASP119 3.7 100.0 1.0 HA F:ASP102 3.8 100.0 1.0 CA F:GLY120 3.9 100.0 1.0 HG22 F:VAL121 3.9 100.0 1.0 HA F:ASP119 3.9 100.0 1.0 CE F:LYS195 4.0 100.0 1.0 CA F:ASP102 4.1 100.0 1.0 OD2 F:ASP102 4.1 100.0 1.0 O F:ASP102 4.1 100.0 1.0 CB F:ILE103 4.1 100.0 1.0 HG2 F:LYS195 4.1 100.0 1.0 OD2 F:ASP119 4.1 100.0 1.0 HG23 F:VAL121 4.2 100.0 1.0 CA F:ASP119 4.2 100.0 1.0 O F:ASP119 4.3 100.0 1.0 HZ3 F:LYS195 4.3 100.0 1.0 CB F:ASP102 4.3 100.0 1.0 N F:PRO104 4.3 100.0 1.0 HD3 F:LYS195 4.3 100.0 1.0 CB F:ASP119 4.3 100.0 1.0 HA F:PRO104 4.4 100.0 1.0 N F:VAL121 4.5 100.0 1.0 HA3 F:GLY120 4.5 100.0 1.0 HA F:VAL121 4.5 100.0 1.0 HA F:ILE103 4.5 100.0 1.0 CG2 F:VAL121 4.5 100.0 1.0 HA2 F:GLY120 4.5 100.0 1.0 HE3 F:LYS195 4.6 100.0 1.0 CD F:LYS195 4.6 100.0 1.0 NZ F:LYS195 4.6 100.0 1.0 HG13 F:ILE103 4.7 100.0 1.0 CA F:PRO104 4.7 100.0 1.0 C F:PRO104 4.7 100.0 1.0 H1 F:HOH402 4.7 50.0 1.0 O F:HOH402 4.7 50.0 1.0 HB3 F:ASP119 4.8 100.0 1.0 CG F:LYS195 4.8 100.0 1.0 HB3 F:ASP102 4.8 100.0 1.0 HD3 F:PRO105 4.8 100.0 1.0 HZ1 F:LYS195 4.9 100.0 1.0 O F:PRO104 4.9 100.0 1.0 CA F:VAL121 4.9 100.0 1.0 HB2 F:ASP102 5.0 100.0 1.0 CG1 F:ILE103 5.0 100.0 1.0

Sodium binding site 7 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 7 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ G:Na301 b:50.0 occ:1.00 O G:GLY120 2.1 100.0 1.0 OD1 G:ASP119 2.1 100.0 1.0 OD1 G:ASP102 2.2 100.0 1.0 O G:ILE103 2.2 100.0 1.0 H G:ILE103 3.0 100.0 1.0 N G:ILE103 3.2 100.0 1.0 H G:GLY120 3.2 100.0 1.0 C G:GLY120 3.2 100.0 1.0 C G:ILE103 3.2 100.0 1.0 N G:GLY120 3.3 100.0 1.0 CG G:ASP119 3.3 100.0 1.0 HB G:ILE103 3.4 100.0 1.0 CG G:ASP102 3.4 100.0 1.0 C G:ASP102 3.6 100.0 1.0 C G:ASP119 3.6 100.0 1.0 CA G:ILE103 3.6 100.0 1.0 HA G:ASP102 3.7 100.0 1.0 HE2 G:LYS195 3.7 100.0 1.0 CA G:GLY120 3.8 100.0 1.0 HG22 G:VAL121 3.8 100.0 1.0 HA G:ASP119 3.9 100.0 1.0 OD2 G:ASP119 4.0 100.0 1.0 CB G:ILE103 4.0 100.0 1.0 CA G:ASP102 4.0 100.0 1.0 HG23 G:VAL121 4.0 100.0 1.0 O G:ASP119 4.1 100.0 1.0 CA G:ASP119 4.2 100.0 1.0 O G:ASP102 4.2 100.0 1.0 HZ2 G:LYS195 4.2 100.0 1.0 OD2 G:ASP102 4.3 100.0 1.0 CB G:ASP119 4.3 100.0 1.0 CB G:ASP102 4.3 100.0 1.0 N G:VAL121 4.3 100.0 1.0 HA G:VAL121 4.4 100.0 1.0 HA2 G:GLY120 4.4 100.0 1.0 CG2 G:VAL121 4.4 100.0 1.0 N G:PRO104 4.4 100.0 1.0 HA3 G:GLY120 4.4 100.0 1.0 HA G:ILE103 4.5 100.0 1.0 HA G:PRO104 4.5 100.0 1.0 CE G:LYS195 4.5 100.0 1.0 HB2 G:LYS195 4.5 100.0 1.0 HD3 G:LYS195 4.6 100.0 1.0 HG13 G:ILE103 4.6 100.0 1.0 HZ3 G:LYS195 4.7 100.0 1.0 HB3 G:ASP119 4.7 100.0 1.0 NZ G:LYS195 4.7 100.0 1.0 O G:HOH409 4.7 50.0 1.0 HB3 G:LYS195 4.7 100.0 1.0 H1 G:HOH409 4.7 50.0 1.0 CA G:VAL121 4.8 100.0 1.0 CA G:PRO104 4.8 100.0 1.0 HB3 G:ASP102 4.8 100.0 1.0 C G:PRO104 4.9 100.0 1.0 CG1 G:ILE103 4.9 100.0 1.0 HG23 G:ILE103 5.0 100.0 1.0

Sodium binding site 8 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 8 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ H:Na301 b:50.0 occ:1.00 O H:ILE103 2.1 100.0 1.0 OD1 H:ASP119 2.1 100.0 1.0 O H:GLY120 2.2 100.0 1.0 OD1 H:ASP102 2.2 100.0 1.0 H H:ILE103 3.0 100.0 1.0 N H:ILE103 3.1 100.0 1.0 C H:ILE103 3.1 100.0 1.0 HE2 H:LYS195 3.1 100.0 1.0 H H:GLY120 3.2 100.0 1.0 C H:GLY120 3.3 100.0 1.0 N H:GLY120 3.3 100.0 1.0 CG H:ASP119 3.3 100.0 1.0 CG H:ASP102 3.4 100.0 1.0 HB H:ILE103 3.4 100.0 1.0 C H:ASP102 3.5 100.0 1.0 CA H:ILE103 3.5 100.0 1.0 C H:ASP119 3.6 100.0 1.0 HA H:ASP102 3.7 100.0 1.0 CA H:GLY120 3.8 100.0 1.0 HG22 H:VAL121 3.9 100.0 1.0 HA H:ASP119 3.9 100.0 1.0 CB H:ILE103 4.0 100.0 1.0 CA H:ASP102 4.0 100.0 1.0 OD2 H:ASP119 4.1 100.0 1.0 CE H:LYS195 4.1 100.0 1.0 HG23 H:VAL121 4.1 100.0 1.0 O H:ASP102 4.1 100.0 1.0 HG2 H:LYS195 4.1 100.0 1.0 O H:ASP119 4.2 100.0 1.0 CA H:ASP119 4.2 100.0 1.0 OD2 H:ASP102 4.2 100.0 1.0 CB H:ASP119 4.3 100.0 1.0 N H:PRO104 4.3 100.0 1.0 CB H:ASP102 4.3 100.0 1.0 HZ3 H:LYS195 4.4 100.0 1.0 HD3 H:LYS195 4.4 100.0 1.0 N H:VAL121 4.4 100.0 1.0 HA H:VAL121 4.4 100.0 1.0 HA H:ILE103 4.4 100.0 1.0 HA3 H:GLY120 4.5 100.0 1.0 CG2 H:VAL121 4.5 100.0 1.0 HA2 H:GLY120 4.5 100.0 1.0 HA H:PRO104 4.5 100.0 1.0 HG13 H:ILE103 4.6 100.0 1.0 O H:HOH401 4.6 50.0 1.0 H1 H:HOH401 4.6 50.0 1.0 HE3 H:LYS195 4.7 100.0 1.0 NZ H:LYS195 4.7 100.0 1.0 CD H:LYS195 4.7 100.0 1.0 C H:PRO104 4.7 100.0 1.0 HB3 H:ASP119 4.7 100.0 1.0 CA H:PRO104 4.7 100.0 1.0 HZ1 H:LYS195 4.8 100.0 1.0 HB3 H:ASP102 4.8 100.0 1.0 CG H:LYS195 4.9 100.0 1.0 CG1 H:ILE103 4.9 100.0 1.0 CA H:VAL121 4.9 100.0 1.0 HD3 H:PRO105 4.9 100.0 1.0 O H:PRO104 4.9 100.0 1.0 HG22 H:ILE103 5.0 100.0 1.0 HB2 H:ASP102 5.0 100.0 1.0

Sodium binding site 9 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 9 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ I:Na301 b:50.0 occ:1.00 O I:GLY120 2.1 100.0 1.0 OD1 I:ASP119 2.1 100.0 1.0 OD1 I:ASP102 2.2 100.0 1.0 O I:ILE103 2.2 100.0 1.0 H I:ILE103 3.0 100.0 1.0 H I:GLY120 3.2 100.0 1.0 N I:ILE103 3.2 100.0 1.0 C I:GLY120 3.2 100.0 1.0 C I:ILE103 3.2 100.0 1.0 N I:GLY120 3.2 100.0 1.0 CG I:ASP119 3.3 100.0 1.0 HB I:ILE103 3.4 100.0 1.0 CG I:ASP102 3.4 100.0 1.0 C I:ASP119 3.6 100.0 1.0 CA I:ILE103 3.6 100.0 1.0 C I:ASP102 3.6 100.0 1.0 HA I:ASP102 3.7 100.0 1.0 CA I:GLY120 3.7 100.0 1.0 HG22 I:VAL121 3.8 100.0 1.0 HE2 I:LYS195 3.8 100.0 1.0 HA I:ASP119 3.9 100.0 1.0 HG23 I:VAL121 4.0 100.0 1.0 CB I:ILE103 4.0 100.0 1.0 OD2 I:ASP119 4.0 100.0 1.0 O I:ASP119 4.0 100.0 1.0 CA I:ASP102 4.1 100.0 1.0 CA I:ASP119 4.1 100.0 1.0 OD2 I:ASP102 4.2 100.0 1.0 O I:ASP102 4.2 100.0 1.0 CB I:ASP119 4.3 100.0 1.0 HZ2 I:LYS195 4.3 100.0 1.0 N I:VAL121 4.3 100.0 1.0 CB I:ASP102 4.3 100.0 1.0 HA2 I:GLY120 4.4 100.0 1.0 CG2 I:VAL121 4.4 100.0 1.0 HA I:VAL121 4.4 100.0 1.0 N I:PRO104 4.4 100.0 1.0 HA3 I:GLY120 4.4 100.0 1.0 HA I:ILE103 4.5 100.0 1.0 HA I:PRO104 4.5 100.0 1.0 HB2 I:LYS195 4.5 100.0 1.0 HD3 I:LYS195 4.5 100.0 1.0 HG13 I:ILE103 4.6 100.0 1.0 CE I:LYS195 4.6 100.0 1.0 O I:HOH411 4.6 50.0 1.0 HB3 I:ASP119 4.7 100.0 1.0 H1 I:HOH411 4.7 50.0 1.0 HB3 I:LYS195 4.7 100.0 1.0 NZ I:LYS195 4.8 100.0 1.0 HZ3 I:LYS195 4.8 100.0 1.0 CA I:VAL121 4.8 100.0 1.0 CA I:PRO104 4.8 100.0 1.0 HB3 I:ASP102 4.8 100.0 1.0 C I:PRO104 4.9 100.0 1.0 CG1 I:ILE103 4.9 100.0 1.0 HG23 I:ILE103 5.0 100.0 1.0

Sodium binding site 10 out of 16 in the Human Stomatin Complex in Native Membrane Vesicles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 10 of Human Stomatin Complex in Native Membrane Vesicles within 5.0Å range: probe atom residue distance (Å) B Occ J:Na301 b:50.0 occ:1.00 O J:ILE103 2.1 100.0 1.0 OD1 J:ASP119 2.1 100.0 1.0 OD1 J:ASP102 2.2 100.0 1.0 O J:GLY120 2.2 100.0 1.0 H J:ILE103 3.1 100.0 1.0 C J:ILE103 3.2 100.0 1.0 N J:ILE103 3.2 100.0 1.0 H J:GLY120 3.2 100.0 1.0 HE2 J:LYS195 3.3 100.0 1.0 C J:GLY120 3.3 100.0 1.0 N J:GLY120 3.3 100.0 1.0 CG J:ASP119 3.3 100.0 1.0 CG J:ASP102 3.4 100.0 1.0 HB J:ILE103 3.5 100.0 1.0 C J:ASP102 3.6 100.0 1.0 CA J:ILE103 3.6 100.0 1.0 C J:ASP119 3.6 100.0 1.0 HA J:ASP102 3.7 100.0 1.0 CA J:GLY120 3.8 100.0 1.0 HA J:ASP119 3.9 100.0 1.0 HG22 J:VAL121 3.9 100.0 1.0 CB J:ILE103 4.0 100.0 1.0 CA J:ASP102 4.1 100.0 1.0 OD2 J:ASP119 4.1 100.0 1.0 HG2 J:LYS195 4.1 100.0 1.0 O J:ASP102 4.1 100.0 1.0 CA J:ASP119 4.1 100.0 1.0 OD2 J:ASP102 4.1 100.0 1.0 O J:ASP119 4.2 100.0 1.0 HG23 J:VAL121 4.2 100.0 1.0 CE J:LYS195 4.2 100.0 1.0 CB J:ASP119 4.3 100.0 1.0 CB J:ASP102 4.3 100.0 1.0 HD3 J:LYS195 4.3 100.0 1.0 N J:PRO104 4.3 100.0 1.0 HZ3 J:LYS195 4.4 100.0 1.0 N J:VAL121 4.5 100.0 1.0 HA J:VAL121 4.5 100.0 1.0 HA3 J:GLY120 4.5 100.0 1.0 HA J:PRO104 4.5 100.0 1.0 HA2 J:GLY120 4.5 100.0 1.0 HA J:ILE103 4.5 100.0 1.0 CG2 J:VAL121 4.5 100.0 1.0 HG13 J:ILE103 4.6 100.0 1.0 CD J:LYS195 4.7 100.0 1.0 O J:HOH402 4.7 50.0 1.0 HB3 J:ASP119 4.7 100.0 1.0 C J:PRO104 4.7 100.0 1.0 CA J:PRO104 4.7 100.0 1.0 H1 J:HOH402 4.7 50.0 1.0 NZ J:LYS195 4.8 100.0 1.0 HE3 J:LYS195 4.8 100.0 1.0 CG J:LYS195 4.8 100.0 1.0 HB3 J:ASP102 4.9 100.0 1.0 HD3 J:PRO105 4.9 100.0 1.0 CA J:VAL121 4.9 100.0 1.0 O J:PRO104 4.9 100.0 1.0 CG1 J:ILE103 5.0 100.0 1.0 HB2 J:ASP102 5.0 100.0 1.0

J.Stoner, Z.Fu. Human Stomatin Complex in Native Membrane Vesicles at 2.2 Angstroms Resolution To Be Published.