Sodium in PDB 8q5z: Crystal Structure of Bovine Thiosulfate Sulfurtransferase

The structure of Crystal Structure of Bovine Thiosulfate Sulfurtransferase, PDB code: 8q5z was solved by H.V.Goor, M.R.Groves, Z.M.Al-Dahmani, C.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.86 / 1.50
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	153.857, 49.506, 41.863, 90, 98.5, 90
R / Rfree (%)	14.6 / 16.3

The binding sites of Sodium atom in the Crystal Structure of Bovine Thiosulfate Sulfurtransferase (pdb code 8q5z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Bovine Thiosulfate Sulfurtransferase, PDB code: 8q5z:

Sodium binding site 1 out of 1 in the Crystal Structure of Bovine Thiosulfate Sulfurtransferase


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Bovine Thiosulfate Sulfurtransferase within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:9.0 occ:1.00 O A:LYS250 2.3 8.5 1.0 O A:ASP273 2.3 6.8 1.0 O A:VAL73 2.3 8.8 1.0 OD1 A:ASP273 2.4 8.1 1.0 O A:GLU72 2.6 9.4 1.0 C A:VAL73 3.1 9.0 1.0 HA A:MET74 3.2 8.2 1.0 HH22 A:ARG111 3.3 8.3 1.0 C A:LYS250 3.3 7.7 1.0 C A:ASP273 3.3 6.7 1.0 HA3 A:GLY251 3.3 7.6 1.0 SD A:MET74 3.3 9.8 1.0 HB A:VAL73 3.3 10.0 1.0 CG A:ASP273 3.4 7.1 1.0 C A:GLU72 3.7 9.2 1.0 HA A:ASP273 3.7 6.8 1.0 N A:MET74 3.7 8.3 1.0 HH12 A:ARG111 3.9 8.7 1.0 CA A:MET74 3.9 8.2 1.0 CA A:ASP273 3.9 6.7 1.0 HA A:LYS250 3.9 8.7 1.0 NH2 A:ARG111 3.9 8.5 1.0 HB2 A:LYS250 4.0 9.9 1.0 CA A:VAL73 4.0 9.2 1.0 O A:HOH505 4.0 11.1 1.0 HA2 A:GLY274 4.0 6.9 1.0 CB A:VAL73 4.1 9.7 1.0 N A:GLY251 4.1 7.5 1.0 CA A:GLY251 4.1 7.5 1.0 OD2 A:ASP273 4.1 9.1 1.0 CB A:ASP273 4.1 7.1 1.0 CA A:LYS250 4.1 8.8 1.0 HG2 A:MET74 4.2 9.0 1.0 N A:VAL73 4.2 9.5 1.0 HG11 A:VAL73 4.2 10.5 1.0 N A:GLY274 4.3 6.8 1.0 CG A:MET74 4.3 8.7 1.0 HH21 A:ARG111 4.4 8.3 1.0 NH1 A:ARG111 4.5 9.1 1.0 H A:MET74 4.5 8.4 1.0 HB3 A:ASP273 4.5 7.0 1.0 HB2 A:SER275 4.5 7.5 1.0 CA A:GLY274 4.6 6.9 1.0 CZ A:ARG111 4.6 8.0 1.0 CB A:LYS250 4.6 10.1 1.0 CE A:MET74 4.6 11.1 1.0 CB A:MET74 4.7 8.8 1.0 CG1 A:VAL73 4.7 10.8 1.0 HE3 A:MET74 4.7 10.7 1.0 HE1 A:MET74 4.8 10.7 1.0 HA2 A:GLY251 4.8 7.6 1.0 HA A:VAL73 4.8 9.3 1.0 C A:GLY274 4.9 6.8 1.0 H A:GLY251 4.9 7.6 1.0 C A:GLY251 4.9 7.7 1.0 O A:GLY274 4.9 7.1 1.0 HB2 A:ASP273 5.0 7.0 1.0 CA A:GLU72 5.0 9.7 1.0

Z.M.Al-Dahmani, M.R.Groves, H.V.Goo. Crystal Structure of Bovine Thiosulfate Sulfurtransferase To Be Published.