Sodium in PDB 8h7n: Structure of Nanobody 11A in Complex with Triazophos

The structure of Structure of Nanobody 11A in Complex with Triazophos, PDB code: 8h7n was solved by H.Wang, J.D.Li, X.Shen, Z.L.Xu, Y.M.Sun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.54 / 1.99
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	84.386, 84.386, 32.988, 90, 90, 120
R / Rfree (%)	21.1 / 24.4

The binding sites of Sodium atom in the Structure of Nanobody 11A in Complex with Triazophos (pdb code 8h7n). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Nanobody 11A in Complex with Triazophos, PDB code: 8h7n:

Sodium binding site 1 out of 1 in the Structure of Nanobody 11A in Complex with Triazophos


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Nanobody 11A in Complex with Triazophos within 5.0Å range: probe atom residue distance (Å) B Occ A:Na205 b:50.2 occ:1.00 OG A:SER21 3.0 43.0 1.0 O A:ARG19 3.4 26.9 1.0 NH2 A:ARG19 4.0 54.5 1.0 NE A:ARG19 4.1 44.5 1.0 CB A:SER21 4.1 34.2 1.0 CA A:GLY8 4.3 32.1 1.0 C A:ARG19 4.3 28.0 1.0 N A:SER21 4.4 28.9 1.0 O A:SER7 4.5 29.8 1.0 CZ A:ARG19 4.6 53.8 1.0 OG A:SER7 4.6 39.5 1.0 C A:LEU20 4.6 29.5 1.0 N A:GLY8 4.8 32.8 1.0 C A:SER7 4.8 31.4 1.0 O A:HOH301 4.8 35.9 1.0 CA A:LEU20 4.8 25.8 1.0 CB A:ARG19 4.9 27.5 1.0 CA A:SER21 4.9 31.5 1.0 N A:LEU20 5.0 25.6 1.0

L.Jiadong, W.Hong. Structure of Nanobody 11A in Complex with Triazophos To Be Published.