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Atomistry » Sodium » PDB 7zyq-8acy » 8a67 » |
Sodium in PDB 8a67: Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)Protein crystallography data
The structure of Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation), PDB code: 8a67
was solved by
S.M.Lange,
Y.Kulathu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 8a67:
The structure of Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation) also contains other interesting chemical elements:
Sodium Binding Sites:
The binding sites of Sodium atom in the Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
(pdb code 8a67). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation), PDB code: 8a67: Jump to Sodium binding site number: 1; 2; Sodium binding site 1 out of 2 in 8a67Go back to Sodium Binding Sites List in 8a67
Sodium binding site 1 out
of 2 in the Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
Mono view Stereo pair view
Sodium binding site 2 out of 2 in 8a67Go back to Sodium Binding Sites List in 8a67
Sodium binding site 2 out
of 2 in the Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
Mono view Stereo pair view
Reference:
S.M.Lange,
M.R.Mcfarland,
F.Lamoliatte,
D.Kwasna,
L.Shen,
I.Wallace,
I.Cole,
L.A.Armstrong,
A.Knebel,
C.Johnson,
V.De Cesare,
Y.Kulathu.
Comprehensive Approach to Study Branched Ubiquitin Chains Reveals Roles For K48-K63 Branches in Vcp/P97-Related Processes Biorxiv 2023.
Page generated: Wed Oct 9 10:27:26 2024
ISSN: ISSN 2692-8205 DOI: 10.1101/2023.01.10.523363 |
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