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Atomistry » Sodium » PDB 7oin-7p51 » 7op6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Sodium » PDB 7oin-7p51 » 7op6 » |
Sodium in PDB 7op6: Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol AziridineProtein crystallography data
The structure of Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine, PDB code: 7op6
was solved by
N.G.S.Mcgregor,
T.J.M.Beenakker,
C.Kuo,
C.Wong,
W.A.Offen,
Z.Armstrong,
J.D.C.Codee,
J.M.F.G.Aerts,
B.I.Florea,
H.S.Overkleeft,
G.J.Davies,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 7op6:
The structure of Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine also contains other interesting chemical elements:
Sodium Binding Sites:
The binding sites of Sodium atom in the Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine
(pdb code 7op6). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine, PDB code: 7op6: Jump to Sodium binding site number: 1; 2; 3; Sodium binding site 1 out of 3 in 7op6Go back to Sodium Binding Sites List in 7op6
Sodium binding site 1 out
of 3 in the Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine
Mono view Stereo pair view
Sodium binding site 2 out of 3 in 7op6Go back to Sodium Binding Sites List in 7op6
Sodium binding site 2 out
of 3 in the Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine
Mono view Stereo pair view
Sodium binding site 3 out of 3 in 7op6Go back to Sodium Binding Sites List in 7op6
Sodium binding site 3 out
of 3 in the Bacteroides Thetaiotaomicron Mannosidase GH2 with Beta-Manno- Configured Cyclophellitol Aziridine
Mono view Stereo pair view
Reference:
N.G.S.Mcgregor,
C.L.Kuo,
T.J.M.Beenakker,
C.S.Wong,
W.A.Offen,
Z.Armstrong,
B.I.Florea,
J.D.C.Codee,
H.S.Overkleeft,
J.M.F.G.Aerts,
G.J.Davies.
Synthesis of Broad-Specificity Activity-Based Probes For Exo -Beta-Mannosidases. Org.Biomol.Chem. V. 20 877 2022.
Page generated: Fri Apr 7 15:28:25 2023
ISSN: ESSN 1477-0539 PubMed: 35015006 DOI: 10.1039/D1OB02287C |
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