Sodium in PDB 7cc4: A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica

The structure of A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica, PDB code: 7cc4 was solved by K.Suzuki, T.Watanabe, H.Kitamoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.50 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.150, 61.596, 109.937, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 21.6

The binding sites of Sodium atom in the A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica (pdb code 7cc4). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica, PDB code: 7cc4:

Sodium binding site 1 out of 1 in the A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica within 5.0Å range: probe atom residue distance (Å) B Occ B:Na201 b:1.3 occ:1.00 O B:HOH362 3.0 14.6 1.0 N B:GLY124 3.2 9.9 1.0 O B:HOH365 3.3 13.6 1.0 N B:TYR158 3.4 6.5 1.0 CB B:ASP123 3.7 7.6 1.0 CA B:GLY124 3.7 11.3 1.0 CA B:ILE157 3.8 6.0 1.0 CG B:ASP123 4.1 7.5 1.0 N B:ASN125 4.1 13.9 1.0 C B:ILE157 4.1 6.2 1.0 CB B:TYR158 4.1 7.2 1.0 CG2 B:ILE157 4.2 5.8 1.0 C B:ASP123 4.2 8.8 1.0 OD1 B:ASP123 4.3 7.5 1.0 C B:GLY124 4.3 12.3 1.0 CB B:ILE157 4.3 5.8 1.0 CA B:TYR158 4.4 6.7 1.0 CA B:ASP123 4.4 7.8 1.0 CG1 B:ILE157 4.4 6.0 1.0 ND2 B:ASN125 4.5 18.1 1.0 O B:HOH380 4.5 17.7 1.0 OG1 B:THR129 4.6 9.1 1.0 O B:CYS156 4.7 5.6 1.0 OD2 B:ASP123 4.7 6.7 1.0 CG B:ASN125 4.8 17.4 1.0 O B:TYR158 5.0 5.9 1.0 N B:ILE157 5.0 5.7 1.0

K.Suzuki, T.Watanabe, H.Kitamoto. A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast Pseudozyma Antarctica To Be Published.