Sodium in PDB, part 192 (files: 7641-7680),
PDB 6cto-6d4o
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 7641-7680 (PDB 6cto-6d4o).
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6cto (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CF2, Beta, Gamma Dttp Analogue
Other atoms:
F (2);
Mg (1);
Cl (2);
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6ctp (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CH2, Beta, Gamma Dttp Analogue
Other atoms:
Mg (1);
Cl (3);
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6ctq (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Dctp
Other atoms:
Mg (2);
Cl (2);
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6ctr (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chf (R & S Isomers), Beta, Gamma Dctp Analogue
Other atoms:
F (2);
Mg (2);
Cl (1);
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6ctt (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chcl (R &Amp; S Isomers, Beta, Gamma Dctp Analogue
Other atoms:
Mg (2);
Cl (3);
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6ctu (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Cfcl, Beta, Gamma Dctp Analogue
Other atoms:
F (1);
Mg (2);
Cl (2);
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6ctv (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CF2, Beta, Gamma Dctp Analogue
Other atoms:
F (2);
Mg (2);
Cl (1);
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6ctw (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CCL2, Beta, Gamma Dctp Analogue
Other atoms:
Mg (2);
Cl (3);
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6ctx (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CBR2, Beta, Gamma Dctp Analogue
Other atoms:
Mg (2);
Br (2);
Cl (1);
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6cu9 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Ctp and Manganese
Other atoms:
Mn (2);
Cl (1);
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6cua (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Gtp and Manganese
Other atoms:
Mn (2);
Cl (1);
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6cub (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Atp and Manganese
Other atoms:
Mn (2);
Cl (1);
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6cuo (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
Other atoms:
Mg (1);
Cl (1);
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6cup (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
Other atoms:
F (1);
Mg (1);
Cl (1);
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6cur (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
Other atoms:
F (1);
Mg (1);
Cl (1);
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6cut (Na: 4) - Engineered Holo Trpb From Pyrococcus Furiosus, PFTRPB7E6 with (2S,3S)- Isopropylserine Bound As the External Aldimine
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6cuv (Na: 4) - Engineered Holo Trpb From Pyrococcus Furiosus, PFTRPB7E6
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6cuz (Na: 6) - Engineered Trpb From Pyrococcus Furiosus, PFTRPB7E6 with (2S,3R)- Ethylserine Bound As the Amino-Acrylate
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6cvd (Na: 1) - High Resolution Crystal Structure of Ftsy-Ng Domain of E. Coli Bound to Fragment 1
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6cvm (Na: 8) - Atomic Resolution Cryo-Em Structure of Beta-Galactosidase
Other atoms:
Mg (8);
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6cvp (Na: 1) - Human Aprataxin (Aptx) R199H Bound to Rna-Dna, Amp and Zn Product Complex
Other atoms:
Zn (2);
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6cvq (Na: 1) - Human Aprataxin (Aptx) H201Q Bound to Rna-Dna, Amp and Zn Product Complex
Other atoms:
Zn (2);
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6cwb (Na: 1) - Structure of Alpha-Gsa[8,4P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cx5 (Na: 1) - Structure of Alpha-Gsa[8,8P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cx7 (Na: 5) - Structure of Alpha-Gsa[12,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cx9 (Na: 7) - Structure of Alpha-Gsa[16,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cxa (Na: 4) - Structure of Alpha-Gsa[20,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cxe (Na: 4) - Structure of Alpha-Gsa[26,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cxf (Na: 6) - Structure of Alpha-Gsa[26,P5P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
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6cy6 (Na: 1) - Crystal Structure of Spermidine/Spermine N-Acetyltransferase Speg From Escherichia Coli in Complex with Tris(Hydroxymethyl)Aminomethane.
Other atoms:
Cl (8);
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6cym (Na: 2) - Reversible Covalent Direct Thrombin Inhibitors
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6czy (Na: 1) - Crystal Structure of Arabidopsis Thaliana Phosphoserine Aminotransferase Isoform 1 (ATPSAT1) in Complex with Pyridoxamine-5'- Phosphate (Pmp)
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6czz (Na: 2) - Crystal Structure of Arabidopsis Thaliana Phosphoserine Aminotransferase Isoform 1 (ATPSAT1) in Complex with Plp- Phosphoserine Geminal Diamine Intermediate
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6d0w (Na: 1) - Structure of Human Transthyretin Complex with Analgesic Inhibitor
Other atoms:
Cl (4);
-
6d1p (Na: 5) - Apo Structure of Bacteroides Uniformis Beta-Glucuronidase 3
Other atoms:
K (4);
-
6d1u (Na: 4) - Crystal Structure of the Human Clr:RAMP1 Extracellular Domain Heterodimer in Complex with Adrenomedullin 2/Intermedin
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6d2e (Na: 1) - Crystal Structure of Corynebacterium Diphtheriae Udp-Galactopyranose Mutase in Complex with Udp-Galactopyranose (Open, Oxidized)
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6d2g (Na: 1) - Crystal Structure of Corynebacterium Diphtheriae Udp-Galactopyranose Mutase in Complex with Udp-Galactopyranose (Open, Reduced)
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6d2s (Na: 2) - Mycobacterium Tuberculosis Transcriptional Regulator
Other atoms:
Ca (2);
Cl (2);
-
6d4o (Na: 1) - Eubacterium Eligens Beta-Glucuronidase Bound to An Amoxapine- Glucuronide Conjugate
Other atoms:
Cl (2);
Page generated: Wed Nov 13 13:04:32 2024
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