Atomistry » Sodium » PDB 6ctv-6d5j
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Sodium in PDB, part 192 (files: 7641-7680), PDB 6ctv-6d5j

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7641-7680 (PDB 6ctv-6d5j).
  1. 6ctv (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CF2, Beta, Gamma Dctp Analogue
    Other atoms: F (2); Mg (2); Cl (1);
  2. 6ctw (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CCL2, Beta, Gamma Dctp Analogue
    Other atoms: Mg (2); Cl (3);
  3. 6ctx (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CBR2, Beta, Gamma Dctp Analogue
    Other atoms: Mg (2); Br (2); Cl (1);
  4. 6cu9 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Ctp and Manganese
    Other atoms: Mn (2); Cl (1);
  5. 6cua (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Gtp and Manganese
    Other atoms: Mn (2); Cl (1);
  6. 6cub (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Atp and Manganese
    Other atoms: Mn (2); Cl (1);
  7. 6cuo (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: Mg (1); Cl (1);
  8. 6cup (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
  9. 6cur (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
  10. 6cut (Na: 4) - Engineered Holo Trpb From Pyrococcus Furiosus, PFTRPB7E6 with (2S,3S)- Isopropylserine Bound As the External Aldimine
  11. 6cuv (Na: 4) - Engineered Holo Trpb From Pyrococcus Furiosus, PFTRPB7E6
  12. 6cuz (Na: 6) - Engineered Trpb From Pyrococcus Furiosus, PFTRPB7E6 with (2S,3R)- Ethylserine Bound As the Amino-Acrylate
  13. 6cvd (Na: 1) - High Resolution Crystal Structure of Ftsy-Ng Domain of E. Coli Bound to Fragment 1
  14. 6cvm (Na: 8) - Atomic Resolution Cryo-Em Structure of Beta-Galactosidase
    Other atoms: Mg (8);
  15. 6cvp (Na: 1) - Human Aprataxin (Aptx) R199H Bound to Rna-Dna, Amp and Zn Product Complex
    Other atoms: Zn (2);
  16. 6cvq (Na: 1) - Human Aprataxin (Aptx) H201Q Bound to Rna-Dna, Amp and Zn Product Complex
    Other atoms: Zn (2);
  17. 6cwb (Na: 1) - Structure of Alpha-Gsa[8,4P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  18. 6cx5 (Na: 1) - Structure of Alpha-Gsa[8,8P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  19. 6cx7 (Na: 5) - Structure of Alpha-Gsa[12,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  20. 6cx9 (Na: 7) - Structure of Alpha-Gsa[16,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  21. 6cxa (Na: 4) - Structure of Alpha-Gsa[20,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  22. 6cxe (Na: 4) - Structure of Alpha-Gsa[26,6P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  23. 6cxf (Na: 6) - Structure of Alpha-Gsa[26,P5P] Bound By CD1D and in Complex with the VA14VB8.2 Tcr
  24. 6cy6 (Na: 1) - Crystal Structure of Spermidine/Spermine N-Acetyltransferase Speg From Escherichia Coli in Complex with Tris(Hydroxymethyl)Aminomethane.
    Other atoms: Cl (8);
  25. 6cym (Na: 2) - Reversible Covalent Direct Thrombin Inhibitors
  26. 6czy (Na: 1) - Crystal Structure of Arabidopsis Thaliana Phosphoserine Aminotransferase Isoform 1 (ATPSAT1) in Complex with Pyridoxamine-5'- Phosphate (Pmp)
  27. 6czz (Na: 2) - Crystal Structure of Arabidopsis Thaliana Phosphoserine Aminotransferase Isoform 1 (ATPSAT1) in Complex with Plp- Phosphoserine Geminal Diamine Intermediate
  28. 6d0w (Na: 1) - Structure of Human Transthyretin Complex with Analgesic Inhibitor
    Other atoms: Cl (4);
  29. 6d1p (Na: 5) - Apo Structure of Bacteroides Uniformis Beta-Glucuronidase 3
    Other atoms: K (4);
  30. 6d1u (Na: 4) - Crystal Structure of the Human Clr:RAMP1 Extracellular Domain Heterodimer in Complex with Adrenomedullin 2/Intermedin
  31. 6d2e (Na: 1) - Crystal Structure of Corynebacterium Diphtheriae Udp-Galactopyranose Mutase in Complex with Udp-Galactopyranose (Open, Oxidized)
  32. 6d2g (Na: 1) - Crystal Structure of Corynebacterium Diphtheriae Udp-Galactopyranose Mutase in Complex with Udp-Galactopyranose (Open, Reduced)
  33. 6d2s (Na: 2) - Mycobacterium Tuberculosis Transcriptional Regulator
    Other atoms: Ca (2); Cl (2);
  34. 6d4o (Na: 1) - Eubacterium Eligens Beta-Glucuronidase Bound to An Amoxapine- Glucuronide Conjugate
    Other atoms: Cl (2);
  35. 6d50 (Na: 2) - Bacteroides Uniforms Beta-Glucuronidase 2 Bound to D-Glucaro-1,5- Lactone
    Other atoms: Ca (2);
  36. 6d55 (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
  37. 6d56 (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
  38. 6d59 (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
  39. 6d5e (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (5);
  40. 6d5j (Na: 1) - Ras:Sos:Ras in Complex with A Small Molecule Activator
    Other atoms: F (1); Mg (1); Cl (1);
Page generated: Wed Nov 4 05:36:47 2020

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