Atomistry » Sodium » PDB 6zl4-7a2n » 6zsn
Atomistry »
  Sodium »
    PDB 6zl4-7a2n »
      6zsn »

Sodium in PDB 6zsn: Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated)

Protein crystallography data

The structure of Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated), PDB code: 6zsn was solved by R.Janowski, J.P.Fuenzalida-Werner, K.Mishra, A.C.Stiel, D.Niessing, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.61 / 2.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 118.97, 118.97, 96.23, 90, 90, 90
R / Rfree (%) 19.1 / 25.9

Other elements in 6zsn:

The structure of Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated) also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated) (pdb code 6zsn). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated), PDB code: 6zsn:

Sodium binding site 1 out of 1 in 6zsn

Go back to Sodium Binding Sites List in 6zsn
Sodium binding site 1 out of 1 in the Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na511

b:53.8
occ:1.00
O A:LEU283 3.9 46.9 1.0
O A:ASP177 4.0 47.2 1.0
C A:ASP177 4.5 48.7 1.0
CB A:GLU282 4.6 63.9 1.0
CB A:ASP179 4.6 55.8 1.0
C A:GLY178 4.6 54.6 1.0
CB A:ASP177 4.7 54.3 1.0
N A:LEU283 4.7 43.3 1.0
N A:ASP179 4.7 52.5 1.0
CA A:GLY178 4.7 53.3 1.0
N A:GLY178 4.7 46.8 1.0
C A:LEU283 4.8 44.5 1.0
OE2 A:GLU282 4.9 84.1 1.0
CA A:GLU282 5.0 55.6 1.0
CG A:GLU282 5.0 71.9 1.0

Reference:

J.P.Fuenzalida-Werner, K.Mishra, R.Janowski, D.Niessing, A.C.Stiel. Genetically Encoded Photo-Switchable Indicators, New Tools For Optoacoustic Imaging and Fluorescence Nanoscopy To Be Published.
Page generated: Tue Oct 8 15:39:17 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy