Sodium in PDB 6z5e: Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093

All present enzymatic activity of Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093:
2.7.11.1;

The structure of Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093, PDB code: 6z5e was solved by A.Chaikuad, P.Benderitter, J.Hoflack, A.Denis, S.Knapp, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.36 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	77.760, 78.800, 81.710, 90.00, 90.00, 90.00
R / Rfree (%)	15.7 / 18.3

The binding sites of Sodium atom in the Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093 (pdb code 6z5e). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093, PDB code: 6z5e:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na802 b:25.3 occ:1.00 O A:HOH1253 2.2 59.2 1.0 O A:HOH1251 2.3 50.4 1.0 O A:HOH1264 2.3 42.3 1.0 NE2 A:HIS477 2.3 28.5 1.0 NE2 A:HIS563 2.3 18.2 1.0 CD2 A:HIS477 3.2 26.3 1.0 CD2 A:HIS563 3.3 17.5 1.0 CE1 A:HIS563 3.3 16.9 1.0 CE1 A:HIS477 3.4 27.7 1.0 O A:HOH1130 3.5 39.9 1.0 CG A:HIS477 4.4 25.3 1.0 ND1 A:HIS563 4.4 16.9 1.0 CG A:HIS563 4.4 15.7 1.0 ND1 A:HIS477 4.4 27.3 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na803 b:46.8 occ:1.00 O A:HOH1267 2.1 49.4 1.0 O A:HOH1200 2.7 23.7 1.0 OG1 A:THR757 2.9 8.9 1.0 CB A:THR757 3.6 9.5 1.0 NZ A:LYS761 3.6 13.9 1.0 CE A:LYS761 3.7 14.8 1.0 CA A:THR757 3.9 9.9 1.0 CD A:LYS761 4.1 15.3 1.0 O A:MET756 4.4 11.8 1.0 N A:PHE758 4.5 10.4 1.0 C A:THR757 4.8 10.2 1.0 O A:HOH1027 4.8 29.3 1.0

A.Chaikuad, P.Benderitter, J.Hoflack, A.Denis, S.Knapp, Structural Genomics Consortium (Sgc). Crystal Structure of Haspin (GSG2) in Complex with Macrocycle ODS2004093 To Be Published.