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Sodium in PDB 6t5x: Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution

Enzymatic activity of Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution

All present enzymatic activity of Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution:
1.1.1.100;

Protein crystallography data

The structure of Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution, PDB code: 6t5x was solved by P.Vella, R.Schnell, G.Schneider, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.21 / 1.50
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.430, 71.144, 81.366, 90.00, 94.42, 90.00
R / Rfree (%) 15.9 / 18.5

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution (pdb code 6t5x). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution, PDB code: 6t5x:

Sodium binding site 1 out of 1 in 6t5x

Go back to Sodium Binding Sites List in 6t5x
Sodium binding site 1 out of 1 in the Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na302

b:16.7
occ:1.00
 O A:THR234 2.4 15.9 1.0
OE2 B:GLU233 2.4 16.1 1.0
O B:THR234 2.4 15.8 1.0
OE2 A:GLU233 2.4 16.4 1.0
O B:HOH532 2.4 30.3 1.0
O A:HOH452 2.5 34.1 1.0
CD B:GLU233 3.1 16.3 1.0
CD A:GLU233 3.1 17.3 1.0
OE1 B:GLU233 3.4 17.8 1.0
OE1 A:GLU233 3.4 18.0 1.0
C A:THR234 3.6 14.8 1.0
C B:THR234 3.6 15.6 1.0
CA A:LEU235 4.2 15.3 1.0
CA B:LEU235 4.2 15.2 1.0
CG B:GLU233 4.2 16.2 1.0
CG A:GLU233 4.2 16.3 1.0
CD2 A:HIS236 4.3 16.2 1.0
N A:LEU235 4.3 14.9 1.0
N B:LEU235 4.3 15.5 1.0
CD2 B:HIS236 4.3 16.1 1.0
O A:HOH522 4.5 24.3 1.0
O B:HOH569 4.5 22.2 1.0
N B:THR234 4.6 15.8 1.0
N A:THR234 4.6 14.2 1.0
N A:HIS236 4.6 15.1 1.0
CA B:THR234 4.6 15.6 1.0
CA A:THR234 4.6 15.3 1.0
N B:HIS236 4.7 14.5 1.0
C A:LEU235 5.0 14.8 1.0
C B:LEU235 5.0 14.5 1.0

Reference:

P.Vella, R.Schnell. Crystal Structure of Salmonella Typhimurium Fabg in Complex with Nadph at 1.5 A Resolution To Be Published.
Page generated: Tue Oct 8 13:37:19 2024

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