Sodium in PDB 6stx: Copper Oxidase From Colletotrichum Graminicola

All present enzymatic activity of Copper Oxidase From Colletotrichum Graminicola:
1.1.3.7;

The structure of Copper Oxidase From Colletotrichum Graminicola, PDB code: 6stx was solved by W.A.Offen, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	121.85 / 1.90
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	172.327, 172.327, 172.327, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 21.9

The binding sites of Sodium atom in the Copper Oxidase From Colletotrichum Graminicola (pdb code 6stx). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Copper Oxidase From Colletotrichum Graminicola, PDB code: 6stx:

Sodium binding site 1 out of 1 in the Copper Oxidase From Colletotrichum Graminicola


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Copper Oxidase From Colletotrichum Graminicola within 5.0Å range: probe atom residue distance (Å) B Occ C:Na804 b:25.8 occ:0.50 O C:HOH1192 1.9 33.6 0.5 O C:HOH1023 2.0 42.7 1.0 O C:ASN367 2.2 36.2 1.0 OD1 C:ASP443 2.4 38.0 1.0 O C:PRO442 2.6 37.9 1.0 C C:PRO442 3.2 33.6 1.0 CG C:ASP443 3.3 37.2 1.0 C C:ASN367 3.4 35.0 1.0 N C:ASP443 3.8 30.2 1.0 CB C:PRO442 3.8 39.2 1.0 OD2 C:ASP443 4.0 43.7 1.0 CA C:ASP368 4.0 35.9 1.0 CA C:PRO442 4.0 35.5 1.0 CA C:ASP443 4.1 31.6 1.0 N C:ASP368 4.1 34.3 1.0 OD2 C:ASP419 4.2 34.1 1.0 CB C:ASP443 4.3 32.0 1.0 CA C:ASN367 4.4 38.1 1.0 CB C:ASN367 4.5 41.2 1.0 O C:HOH914 4.6 34.5 0.5 O C:HOH943 4.6 32.8 1.0 OD1 C:ASP418 4.7 44.9 1.0 N C:HIS369 4.7 40.0 1.0 C C:ASP368 4.8 37.2 1.0 N C:ASN367 4.8 33.6 1.0 CG C:ASN367 4.8 47.9 1.0 ND2 C:ASN367 5.0 49.8 0.5

Y.Mathieu, A.H.Viborg, S.M.Forget, H.Brumer, L.Ciano, W.A.Offen, E.Blagova, P.H.Walton, G.J.Davies. Functional Characterization of A Radical Copper Oxidase From the Fungus Colletotrichum Graminicola Reveals 5-Hydroxymethylfurfural To Be Published.