Sodium »
PDB 6r7p-6rjn »
6rca »
Sodium in PDB 6rca: X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
Enzymatic activity of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
All present enzymatic activity of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A:
2.4.2.3;
2.4.2.3;
Protein crystallography data
The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A, PDB code: 6rca
was solved by
I.I.Prokofev,
P.A.Eistrikh-Geller,
V.V.Balaev,
A.G.Gabdoulkhakov,
C.Betzel,
A.A.Lashkov,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 44.60 / 1.35 |
| Space group | P 31 |
| Cell size a, b, c (Å), α, β, γ (°) | 93.245, 93.245, 152.928, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 13.5 / 16.9 |
Other elements in 6rca:
The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Chlorine | (Cl) | 2 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
(pdb code 6rca). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A, PDB code: 6rca:
Jump to Sodium binding site number: 1; 2; 3;
In total 3 binding sites of Sodium where determined in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A, PDB code: 6rca:
Jump to Sodium binding site number: 1; 2; 3;
Sodium binding site 1 out of 3 in 6rca
Go back to
Sodium Binding Sites List in 6rca
Sodium binding site 1 out
of 3 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A within 5.0Å range:
|
Sodium binding site 2 out of 3 in 6rca
Go back to
Sodium Binding Sites List in 6rca
Sodium binding site 2 out
of 3 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A within 5.0Å range:
|
Sodium binding site 3 out of 3 in 6rca
Go back to
Sodium Binding Sites List in 6rca
Sodium binding site 3 out
of 3 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A within 5.0Å range:
|
Reference:
I.I.Prokofev,
P.A.Eistrikh-Geller,
V.V.Balaev,
A.G.Gabdoulkhakov,
C.Betzel,
A.A.Lashkov.
X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A. To Be Published.
Page generated: Tue Oct 8 13:06:41 2024
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
