Sodium in PDB 6pun: Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna

The structure of Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna, PDB code: 6pun was solved by C.Qiu, Z.T.Campbell, T.M.T.Hall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.69 / 2.10
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	42.751, 74.380, 81.547, 107.17, 104.40, 101.76
R / Rfree (%)	19.8 / 24

The binding sites of Sodium atom in the Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna (pdb code 6pun). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna, PDB code: 6pun:

Sodium binding site 1 out of 1 in the Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Ternary Complex of Fbf-2 with Lst-1 (Site B) and Compact Fbe Rna within 5.0Å range: probe atom residue distance (Å) B Occ B:Na300 b:59.2 occ:1.00 N7 B:G3 2.6 44.2 1.0 O B:HOH402 2.6 53.1 1.0 O A:HOH707 2.9 43.3 1.0 O6 B:G3 3.5 47.8 1.0 C5 B:G3 3.5 43.7 1.0 C8 B:G3 3.6 43.5 1.0 CE1 A:TYR501 3.8 36.4 1.0 C6 B:G3 3.9 44.5 1.0 OH A:TYR501 4.2 39.1 1.0 CZ A:TYR501 4.3 37.5 1.0 CD1 A:TYR501 4.6 35.5 1.0 C4 B:G3 4.8 44.2 1.0 N9 B:G3 4.8 43.5 1.0 OP2 B:G3 4.8 48.5 1.0

C.Qiu, V.D.Bhat, S.Rajeev, C.Zhang, A.E.Lasley, R.N.Wine, Z.T.Campbell, T.M.T.Tanaka Hall. A Crystal Structure of A Collaborative Rna Regulatory Complex Reveals Mechanisms to Refine Target Specificity. Elife V. 8 2019.
ISSN: ESSN 2050-084X
PubMed: 31397673
DOI: 10.7554/ELIFE.48968