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Sodium in PDB 6ix4: Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution

Enzymatic activity of Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution

All present enzymatic activity of Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution:
3.3.2.9;

Protein crystallography data

The structure of Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution, PDB code: 6ix4 was solved by D.Hu, B.C.Hu, X.D.Hou, L.Wu, Y.J.Rao, M.C.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.87 / 1.51
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.365, 51.922, 133.488, 90.00, 90.97, 90.00
R / Rfree (%) 14.4 / 16.5

Other elements in 6ix4:

The structure of Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution (pdb code 6ix4). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution, PDB code: 6ix4:

Sodium binding site 1 out of 1 in 6ix4

Go back to Sodium Binding Sites List in 6ix4
Sodium binding site 1 out of 1 in the Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na404

b:16.4
occ:1.00
 O B:LEU112 2.7 10.1 1.0
O B:PRO146 2.7 11.5 1.0
N B:HIS114 2.9 8.3 1.0
CD2 B:HIS114 3.2 9.4 1.0
CA B:LEU113 3.4 6.9 1.0
C B:LEU113 3.6 8.0 1.0
C B:LEU112 3.6 7.5 1.0
CB B:HIS114 3.7 8.8 1.0
CG B:HIS114 3.7 8.3 1.0
CG1 B:VAL145 3.7 8.3 1.0
C B:PRO146 3.8 9.6 1.0
N B:PRO146 3.8 7.2 1.0
CA B:HIS114 3.9 9.1 1.0
CD B:PRO146 3.9 7.8 1.0
N B:LEU113 3.9 7.6 1.0
CE2 B:PHE123 4.0 10.8 1.0
C B:VAL145 4.2 9.4 1.0
CG B:PRO146 4.3 10.6 1.0
NE2 B:HIS114 4.3 10.3 1.0
CD2 B:PHE123 4.4 10.4 1.0
CA B:PRO146 4.4 7.7 1.0
CA B:VAL145 4.4 7.9 1.0
CB B:LEU113 4.7 7.9 1.0
CB B:VAL145 4.7 8.4 1.0
O B:LEU113 4.8 9.4 1.0
O B:VAL145 4.8 8.1 1.0
CD2 B:LEU113 4.9 10.2 1.0
CA B:PHE120 4.9 9.2 1.0
N B:SER147 4.9 7.5 1.0
ND1 B:HIS114 4.9 9.3 1.0
CA B:LEU112 5.0 7.6 1.0
C B:HIS114 5.0 9.6 1.0

Reference:

D.Hu, B.C.Hu, X.D.Hou, Y.J.Rao, M.C.Wu. Structure of An Epoxide Hydrolase From Aspergillus Usamii E001 (AUEH2) at 1.51 Angstroms Resolution To Be Published.
Page generated: Tue Oct 8 09:40:15 2024

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