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Sodium in PDB 6i0c: Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor.

Enzymatic activity of Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor.

All present enzymatic activity of Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor.:
3.1.1.8;

Protein crystallography data

The structure of Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor., PDB code: 6i0c was solved by X.Brazzolotto, F.Nachon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 98.67 / 2.68
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 154.608, 154.608, 128.173, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 25.2

Other elements in 6i0c:

The structure of Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor. also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor. (pdb code 6i0c). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor., PDB code: 6i0c:

Sodium binding site 1 out of 1 in 6i0c

Go back to Sodium Binding Sites List in 6i0c
Sodium binding site 1 out of 1 in the Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human Butyrylcholinesterase in Complex with the R Enantiomer of A Chlorotacrine-Tryptophan Multi-Target Inhibitor. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na618

b:98.0
occ:1.00
OD2 A:ASP129 3.1 72.0 1.0
OD1 A:ASP129 3.6 57.9 1.0
CG A:ASP129 3.7 62.4 1.0
CD A:LYS131 4.3 61.8 1.0
OH A:TYR61 4.3 63.0 1.0
CD1 A:LEU18 4.3 64.8 1.0
NZ A:LYS131 4.5 60.7 1.0
CE2 A:TYR61 4.8 55.6 1.0
NE1 A:TRP98 4.8 63.3 1.0
CD1 A:LEU29 4.9 57.7 1.0
CD2 A:LEU18 4.9 60.8 1.0
CZ A:TYR61 4.9 63.3 1.0
CE A:LYS131 4.9 57.9 1.0

Reference:

K.Chalupova, J.Korabecny, M.Bartolini, B.Monti, D.Lamba, R.Caliandro, A.Pesaresi, X.Brazzolotto, A.J.Gastellier, F.Nachon, J.Pejchal, M.Jarosova, V.Hepnarova, D.Jun, M.Hrabinova, R.Dolezal, J.Zdarova Karasova, M.Mzik, Z.Kristofikova, J.Misik, L.Muckova, P.Jost, O.Soukup, M.Benkova, V.Setnicka, L.Habartova, M.Chvojkova, L.Kleteckova, K.Vales, E.Mezeiova, E.Uliassi, M.Valis, E.Nepovimova, M.L.Bolognesi, K.Kuca. Novel Tacrine-Tryptophan Hybrids: Multi-Target Directed Ligands As Potential Treatment For Alzheimer'S Disease. Eur.J.Med.Chem. V. 168 491 2019.
ISSN: ISSN 0223-5234
PubMed: 30851693
DOI: 10.1016/J.EJMECH.2019.02.021
Page generated: Tue Dec 15 12:23:05 2020

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