Atomistry » Sodium » PDB 6e8u-6eqv » 6elr
Atomistry »
  Sodium »
    PDB 6e8u-6eqv »
      6elr »

Sodium in PDB 6elr: Human JAK1 Kinase Domain in Complex with Compound 7

Enzymatic activity of Human JAK1 Kinase Domain in Complex with Compound 7

All present enzymatic activity of Human JAK1 Kinase Domain in Complex with Compound 7:
2.7.10.2;

Protein crystallography data

The structure of Human JAK1 Kinase Domain in Complex with Compound 7, PDB code: 6elr was solved by J.A.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.18 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.991, 174.093, 44.968, 90.00, 94.37, 90.00
R / Rfree (%) 18.1 / 20.5

Sodium Binding Sites:

The binding sites of Sodium atom in the Human JAK1 Kinase Domain in Complex with Compound 7 (pdb code 6elr). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human JAK1 Kinase Domain in Complex with Compound 7, PDB code: 6elr:

Sodium binding site 1 out of 1 in 6elr

Go back to Sodium Binding Sites List in 6elr
Sodium binding site 1 out of 1 in the Human JAK1 Kinase Domain in Complex with Compound 7


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human JAK1 Kinase Domain in Complex with Compound 7 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na1202

b:43.7
occ:1.00
O B:HOH1379 2.3 36.9 1.0
OD1 B:ASN976 2.8 21.7 1.0
O B:HOH1444 2.9 43.6 1.0
O B:HOH1304 3.1 38.6 1.0
CG B:ASN976 3.6 35.4 1.0
CB B:LYS978 3.7 21.7 1.0
ND2 B:ASN976 3.7 31.4 1.0
N B:GLN979 3.7 17.2 1.0
CG B:LYS978 3.9 31.3 1.0
CB B:GLN979 4.1 16.3 1.0
C B:LYS978 4.3 20.2 1.0
CA B:GLN979 4.3 15.8 1.0
CD B:LYS978 4.4 45.4 1.0
OE1 B:GLN979 4.4 22.6 1.0
CA B:LYS978 4.5 18.6 1.0
NZ B:LYS982 4.6 44.9 1.0
CE B:LYS982 4.9 41.6 1.0

Reference:

N.P.Grimster, J.A.Read. Human JAK1 Kinase Domain in Complex with Compound 7 To Be Published.
Page generated: Tue Oct 8 08:26:17 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy