Sodium in PDB 6aq5: X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose

The structure of X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose, PDB code: 6aq5 was solved by O.Gerlits, R.J.Woods, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.17 / 2.19
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	134.950, 134.950, 81.794, 90.00, 90.00, 120.00
R / Rfree (%)	18 / 20.8

The structure of X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose also contains other interesting chemical elements:

Manganese	(Mn)	2 atoms
Calcium	(Ca)	2 atoms

The binding sites of Sodium atom in the X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose (pdb code 6aq5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose, PDB code: 6aq5:

Sodium binding site 1 out of 1 in the X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose within 5.0Å range: probe atom residue distance (Å) B Occ A:Na311 b:25.5 occ:1.00 O A:GLY163 2.4 22.5 1.0 O A:HOH434 2.5 30.8 1.0 O A:HOH458 2.5 38.1 1.0 O A:HOH504 2.6 28.4 1.0 O A:HOH483 2.7 34.5 1.0 C A:GLY163 3.6 24.3 1.0 OG A:SER77 4.2 30.4 1.0 CA A:GLY163 4.3 21.4 1.0 OH A:TYR229 4.5 25.4 1.0 N A:GLN164 4.7 22.2 1.0 O A:HOH404 4.8 24.9 1.0 CA A:GLN164 4.9 22.3 1.0 O A:HOH426 4.9 23.2 1.0 OE1 A:GLN164 5.0 21.9 1.0 CB A:SER77 5.0 22.4 1.0 OE1 A:GLU79 5.0 29.8 1.0

O.Gerlits, R.J.Woods, A.Sood. X-Ray Crystal Structure of Erythrina Crista-Galli Lectin in Complex with Epilactose To Be Published.