Atomistry » Sodium » PDB 5zxe-6ah7 » 6aea
Atomistry »
  Sodium »
    PDB 5zxe-6ah7 »
      6aea »

Sodium in PDB 6aea: Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions

Enzymatic activity of Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions

All present enzymatic activity of Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions, PDB code: 6aea was solved by Z.Seraj, A.Seyedarabi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.19 / 1.40
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.460, 79.460, 36.950, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 19.8

Other elements in 6aea:

The structure of Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions (pdb code 6aea). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions, PDB code: 6aea:

Sodium binding site 1 out of 1 in 6aea

Go back to Sodium Binding Sites List in 6aea
Sodium binding site 1 out of 1 in the Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na204

b:12.6
occ:1.00
 O A:SER60 2.4 11.6 1.0
O A:CYS64 2.4 9.8 1.0
O A:ARG73 2.4 15.7 1.0
O A:HOH368 2.4 16.2 1.0
O A:HOH358 2.5 11.5 1.0
OG A:SER72 2.5 13.7 1.0
CB A:SER72 3.3 14.2 1.0
C A:CYS64 3.4 9.4 1.0
C A:ARG73 3.5 15.5 1.0
C A:SER60 3.5 11.0 1.0
CA A:ASN65 3.9 12.5 1.0
N A:ARG73 4.0 14.9 1.0
CA A:SER60 4.0 9.6 1.0
N A:ASN65 4.1 10.7 1.0
C A:SER72 4.1 16.8 1.0
CB A:SER60 4.2 9.4 1.0
CA A:ARG73 4.3 15.1 1.0
N A:ASN74 4.3 13.7 1.0
CA A:SER72 4.4 14.9 1.0
N A:CYS64 4.4 11.0 1.0
CA A:ASN74 4.6 13.0 1.0
O A:ARG61 4.6 13.5 1.0
O A:HOH381 4.6 34.2 1.0
CA A:CYS64 4.6 10.6 1.0
N A:ASP66 4.6 9.9 1.0
OD1 A:ASN65 4.6 14.3 1.0
N A:ARG61 4.6 10.7 1.0
C A:ARG61 4.6 12.8 1.0
CL A:CL202 4.6 16.9 1.0
CB A:ASN74 4.7 14.3 1.0
CB A:THR69 4.7 13.9 1.0
O A:SER72 4.7 16.4 1.0
CB A:ASN65 4.7 12.9 1.0
C A:ASN65 4.9 9.5 1.0
CA A:ARG61 4.9 12.0 1.0
N A:TRP62 5.0 12.0 1.0

Reference:

Z.Seraj, A.Seyedarabi. Crystal Structure of Hewl in Complex with Temed (in the Aroma Form) After 5 Hours Under Fibrillation Conditions To Be Published.
Page generated: Tue Oct 8 01:47:59 2024

Last articles

Ca in 2XRG
Ca in 2XR5
Ca in 2XR9
Ca in 2XQX
Ca in 2XQG
Ca in 2XQJ
Ca in 2XQO
Ca in 2XQK
Ca in 2XN6
Ca in 2XON
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy