Sodium in PDB 6a95: Complex of Voltage-Gated Sodium Channel Navpas From American Cockroach Periplaneta Americana Bound with Tetrodotoxin and DC1A

The binding sites of Sodium atom in the Complex of Voltage-Gated Sodium Channel Navpas From American Cockroach Periplaneta Americana Bound with Tetrodotoxin and DC1A (pdb code 6a95). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Complex of Voltage-Gated Sodium Channel Navpas From American Cockroach Periplaneta Americana Bound with Tetrodotoxin and DC1A, PDB code: 6a95:

Sodium binding site 1 out of 1 in the Complex of Voltage-Gated Sodium Channel Navpas From American Cockroach Periplaneta Americana Bound with Tetrodotoxin and DC1A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Complex of Voltage-Gated Sodium Channel Navpas From American Cockroach Periplaneta Americana Bound with Tetrodotoxin and DC1A within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1609 b:6.5 occ:1.00 OD1 A:ASP375 2.6 20.7 1.0 O A:HOH1701 2.8 30.0 1.0 CG A:ASP375 3.2 20.7 1.0 OD2 A:ASP375 3.3 20.7 1.0 N A:TRP702 3.3 19.6 1.0 N A:GLU704 3.4 21.4 1.0 N A:ILE703 3.5 19.1 1.0 CG A:GLU704 3.5 21.4 1.0 CA A:GLU701 3.5 21.0 1.0 CB A:GLU701 3.5 21.0 1.0 C A:GLU701 3.6 21.0 1.0 CD A:GLU704 3.7 21.4 1.0 CG2 A:ILE703 3.7 19.1 1.0 N18 A:9SR1608 3.8 8.1 1.0 CB A:GLU704 3.9 21.4 1.0 OE1 A:GLU704 4.0 21.4 1.0 CG A:GLU701 4.1 21.0 1.0 C A:TRP702 4.1 19.6 1.0 OE2 A:GLU704 4.2 21.4 1.0 CB A:TYR376 4.3 19.0 1.0 CA A:ILE703 4.3 19.1 1.0 CA A:TRP702 4.3 19.6 1.0 CA A:GLU704 4.3 21.4 1.0 C A:ILE703 4.3 19.1 1.0 O A:ASP375 4.4 20.7 1.0 O A:GLU701 4.4 21.0 1.0 CB A:ILE703 4.5 19.1 1.0 CB A:ASP375 4.6 20.7 1.0 C A:ASP375 4.6 20.7 1.0 CD A:GLU701 4.8 21.0 1.0 OE1 A:GLU701 4.8 21.0 1.0 N A:GLU701 4.9 21.0 1.0 NH1 A:ARG696 5.0 21.2 1.0 C13 A:9SR1608 5.0 8.1 1.0 CG A:TYR376 5.0 19.0 1.0

H.Shen, Z.Li, Y.Jiang, X.Pan, J.Wu, B.Cristofori-Armstrong, J.J.Smith, Y.K.Y.Chin, J.Lei, Q.Zhou, G.F.King, N.Yan. Structural Basis For the Modulation of Voltage-Gated Sodium Channels By Animal Toxins. Science V. 362 2018.
ISSN: ESSN 1095-9203
PubMed: 30049784
DOI: 10.1126/SCIENCE.AAU2596