Sodium in PDB 6a4l: Tetr From Mycobacterium Tuberculosis

The structure of Tetr From Mycobacterium Tuberculosis, PDB code: 6a4l was solved by S.M.Kang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.05 / 2.80
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	118.752, 118.752, 93.456, 90.00, 90.00, 120.00
R / Rfree (%)	21.3 / 25.9

The binding sites of Sodium atom in the Tetr From Mycobacterium Tuberculosis (pdb code 6a4l). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the Tetr From Mycobacterium Tuberculosis, PDB code: 6a4l:
Jump to Sodium binding site number: 1; 2; 3;

Sodium binding site 1 out of 3 in the Tetr From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Tetr From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ A:Na303 b:33.4 occ:1.00 N A:ALA47 3.1 28.8 1.0 OG A:SER50 3.1 41.5 1.0 CB A:ALA47 3.6 20.1 1.0 CB A:SER50 3.8 31.4 1.0 CD1 A:LEU46 3.9 43.6 1.0 CA A:LEU46 3.9 22.6 1.0 CA A:ALA47 3.9 28.4 1.0 C A:LEU46 4.0 29.3 1.0 CB A:LEU46 4.4 29.1 1.0 O A:GLY45 4.6 35.5 1.0 O A:ALA47 4.7 32.6 1.0 CG A:LEU46 4.8 33.2 1.0 C A:ALA47 4.8 34.0 1.0

Sodium binding site 2 out of 3 in the Tetr From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Tetr From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ A:Na304 b:61.5 occ:1.00 O A:HOH443 3.0 48.2 1.0 O A:GLY45 3.1 35.5 1.0 C A:GLY45 3.9 35.7 1.0 CG A:ARG41 3.9 29.2 1.0 CD A:ARG41 4.1 30.5 1.0 CA A:GLY45 4.2 30.1 1.0 O A:ARG41 4.9 30.4 1.0 N A:LEU46 4.9 37.7 1.0 O A:HOH427 4.9 30.0 1.0 C A:LEU46 5.0 29.3 1.0 N A:ALA47 5.0 28.8 1.0

Sodium binding site 3 out of 3 in the Tetr From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of Tetr From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ B:Na304 b:45.6 occ:1.00 N B:SER150 3.0 37.7 1.0 CB B:SER150 3.6 27.1 1.0 CA B:PRO149 3.7 22.2 1.0 C B:PRO149 3.8 32.4 1.0 CA B:SER150 3.9 28.8 1.0 CB B:PRO149 4.2 16.9 1.0 N B:PRO149 4.9 23.6 1.0 O B:LEU148 4.9 31.0 1.0 OG B:SER150 5.0 59.4 1.0

S.M.Kang, S.M.Kang. N/A N/A.