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Sodium in PDB 5zxe: Structure of A Consensus Sequence Derived From the Fgf Family

Protein crystallography data

The structure of Structure of A Consensus Sequence Derived From the Fgf Family, PDB code: 5zxe was solved by S.K.Tripathi, V.Mandalaparthy, S.Ramaswamy, S.Gosavi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.44 / 1.30
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 35.718, 45.910, 90.870, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 20.1

Other elements in 5zxe:

The structure of Structure of A Consensus Sequence Derived From the Fgf Family also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of A Consensus Sequence Derived From the Fgf Family (pdb code 5zxe). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of A Consensus Sequence Derived From the Fgf Family, PDB code: 5zxe:

Sodium binding site 1 out of 1 in 5zxe

Go back to Sodium Binding Sites List in 5zxe
Sodium binding site 1 out of 1 in the Structure of A Consensus Sequence Derived From the Fgf Family


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of A Consensus Sequence Derived From the Fgf Family within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na204

b:26.8
occ:1.00
O A:ASP46 2.3 34.1 1.0
O A:HOH302 2.5 71.8 1.0
OG A:SER48 2.6 17.6 0.2
O A:HOH381 2.7 41.8 1.0
NE2 A:HIS31 3.1 17.6 1.0
C A:ASP46 3.1 29.2 1.0
NE A:ARG22 3.2 29.0 1.0
OG A:SER51 3.3 15.9 1.0
N A:SER48 3.3 21.6 0.2
N A:SER48 3.3 19.4 0.8
O A:SER48 3.7 19.9 0.2
CD A:ARG22 3.7 21.0 1.0
O A:GLU45 3.7 18.4 1.0
CB A:SER48 3.7 19.1 0.2
CB A:SER48 3.8 16.4 0.8
CA A:ASP46 3.8 24.9 1.0
O A:SER48 3.8 19.1 0.8
CE1 A:HIS31 3.8 17.2 1.0
CZ A:ARG22 3.9 29.2 1.0
CA A:SER48 3.9 20.2 0.2
CA A:SER48 4.0 17.8 0.8
O A:HOH312 4.0 29.9 1.0
N A:ASN47 4.0 25.8 1.0
CD2 A:HIS31 4.1 16.4 1.0
NH1 A:ARG22 4.2 30.9 1.0
C A:SER48 4.2 19.5 0.2
C A:SER48 4.2 17.6 0.8
OG A:SER48 4.3 19.2 0.8
CA A:ASN47 4.3 27.2 1.0
C A:ASN47 4.3 22.2 1.0
C A:GLU45 4.6 17.1 1.0
CB A:SER51 4.6 15.5 1.0
N A:ASP46 4.7 20.0 1.0
NH2 A:ARG22 4.9 25.7 1.0
CB A:ASP46 4.9 24.6 1.0
CG A:ARG22 5.0 15.0 1.0
ND1 A:HIS31 5.0 14.5 1.0

Reference:

S.K.Tripathi, V.Mandalaparthy, S.Gosavi. Structure of A Consensus Sequence Derived From the Fgf Family To Be Published.
Page generated: Tue Oct 8 01:42:47 2024

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