Sodium in PDB 5zck: Structure of the RIP3 Core Region

The structure of Structure of the RIP3 Core Region, PDB code: 5zck was solved by J.Li, H.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.83 / 1.27
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	4.813, 17.151, 29.564, 90.00, 90.00, 90.00
R / Rfree (%)	13.7 / 15.3

The binding sites of Sodium atom in the Structure of the RIP3 Core Region (pdb code 5zck). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the RIP3 Core Region, PDB code: 5zck:

Sodium binding site 1 out of 1 in the Structure of the RIP3 Core Region


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the RIP3 Core Region within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:35.0 occ:1.00 O A:HOH202 2.4 32.7 1.0 N A:VAL1 3.7 4.0 1.0 CA A:VAL1 4.2 2.6 1.0 OE1 A:GLN2 4.2 3.5 1.0 CG A:GLN2 4.4 2.5 1.0 CD A:GLN2 4.4 2.3 1.0 N A:GLN2 4.4 1.7 1.0 C A:VAL1 4.5 1.9 1.0 CB A:GLN2 5.0 2.1 1.0

M.Mompean, W.Li, J.Li, S.Laage, A.B.Siemer, G.Bozkurt, H.Wu, A.E.Mcdermott. The Structure of the Necrosome RIPK1-RIPK3 Core, A Human Hetero-Amyloid Signaling Complex. Cell V. 173 1244 2018.
ISSN: ISSN 1097-4172
PubMed: 29681455
DOI: 10.1016/J.CELL.2018.03.032