Sodium in PDB 5wqm: Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I)

The structure of Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I), PDB code: 5wqm was solved by S.Li, Y.Wang, M.Bartlam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.35 / 2.60
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	109.150, 109.150, 142.345, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 23.3

The binding sites of Sodium atom in the Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I) (pdb code 5wqm). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I), PDB code: 5wqm:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:40.8 occ:1.00 OE1 A:GLN104 2.8 59.3 1.0 O A:HOH423 3.2 39.6 1.0 O A:GLN101 3.5 31.0 1.0 CA A:GLY88 3.8 36.8 1.0 CA A:GLN101 3.9 34.0 1.0 CB A:GLN101 3.9 35.1 1.0 CD A:PRO89 4.0 37.7 1.0 CD A:GLN104 4.0 52.7 1.0 N A:PRO89 4.0 38.0 1.0 C A:GLY88 4.0 36.9 1.0 CG A:GLN101 4.1 38.1 1.0 C A:GLN101 4.1 31.7 1.0 CG A:PRO89 4.3 38.5 1.0 CB A:GLN104 4.5 41.6 1.0 CB A:LEU105 4.5 32.1 1.0 N A:LEU105 4.6 33.9 1.0 CD1 A:ILE86 4.6 42.8 1.0 CG A:GLN104 4.6 46.7 1.0 O A:GLY88 4.8 39.0 1.0 N A:GLY88 4.8 37.8 1.0 CA A:LEU105 4.9 32.5 1.0 CA A:PRO89 4.9 39.1 1.0 CD A:GLN101 4.9 40.4 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of A Carbonyl Reductase From Pseudomonas Aeruginosa PAO1 (Condition I) within 5.0Å range: probe atom residue distance (Å) B Occ C:Na301 b:46.8 occ:0.50 OE1 C:GLN90 3.6 61.6 1.0 CE2 C:TYR87 4.4 42.1 1.0 CD2 C:TYR87 4.5 39.4 1.0 CZ C:TYR87 4.6 41.7 1.0 CD C:GLN90 4.7 57.1 1.0 CG C:TYR87 4.8 36.3 1.0 CE1 C:TYR87 4.9 38.5 1.0

S.Li, X.Teng, L.Su, G.Mao, Y.Xu, T.Li, R.Liu, Q.Zhang, Y.Wang, M.Bartlam. Structure and Characterization of A Nad(P)H-Dependent Carbonyl Reductase From Pseudomonas Aeruginosa PAO1. Febs Lett. V. 591 1785 2017.
ISSN: ISSN 1873-3468
PubMed: 28524228
DOI: 10.1002/1873-3468.12683