Sodium in PDB 5uju: Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans

All present enzymatic activity of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans:
1.2.1.3;

The structure of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans, PDB code: 5uju was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.18 / 2.05
Space group	P 62
Cell size a, b, c (Å), α, β, γ (°)	114.430, 114.430, 154.520, 90.00, 90.00, 120.00
R / Rfree (%)	14.8 / 19.7

The binding sites of Sodium atom in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans (pdb code 5uju). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans, PDB code: 5uju:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans within 5.0Å range: probe atom residue distance (Å) B Occ A:Na601 b:38.5 occ:1.00 O A:HOH746 2.5 35.1 1.0 O A:HOH834 2.6 41.7 1.0 O A:HOH707 2.6 50.1 1.0 O A:GLY340 2.7 33.9 1.0 O A:HOH813 2.7 28.1 1.0 O A:GLY450 2.7 32.4 1.0 C A:GLY340 3.7 36.4 1.0 CA A:GLY340 3.9 27.2 1.0 O A:HOH810 3.9 36.2 1.0 C A:GLY450 3.9 29.5 1.0 O A:HOH727 4.1 42.8 1.0 O A:TRP448 4.1 44.9 1.0 N A:GLY450 4.2 31.3 1.0 O A:ILE452 4.2 32.8 1.0 CB A:ALA345 4.3 31.3 1.0 O A:PRO346 4.4 30.3 1.0 N A:ILE452 4.6 28.0 1.0 CA A:GLY450 4.6 29.7 1.0 O A:HOH915 4.7 32.0 1.0 O A:ALA345 4.7 28.0 1.0 N A:PRO451 4.8 28.9 1.0 N A:GLN341 4.9 32.6 1.0 CA A:PRO451 4.9 30.9 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans within 5.0Å range: probe atom residue distance (Å) B Occ B:Na602 b:41.6 occ:1.00 O B:HOH880 2.6 31.1 1.0 O B:HOH715 2.7 33.5 1.0 O B:GLY340 2.7 33.3 1.0 O B:HOH779 2.7 31.3 1.0 O B:GLY450 2.8 28.4 1.0 O B:HOH823 2.9 28.8 1.0 C B:GLY340 3.6 31.9 1.0 CA B:GLY340 3.9 30.2 1.0 O B:TRP448 3.9 37.8 1.0 C B:GLY450 3.9 23.5 1.0 O B:ILE452 4.2 27.6 1.0 N B:GLY450 4.2 28.6 1.0 O B:HOH913 4.3 39.5 1.0 CB B:ALA345 4.4 27.5 1.0 O B:PRO346 4.5 31.7 1.0 N B:ILE452 4.6 29.4 1.0 CA B:GLY450 4.7 25.1 1.0 O B:HOH875 4.8 26.9 1.0 N B:GLN341 4.8 33.8 1.0 O B:ALA345 4.8 30.4 1.0 N B:PRO451 4.9 22.9 1.0 CA B:PRO451 4.9 25.2 1.0

J.Abendroth, S.J.Mayclin, D.Lorimer, T.E.Edwards. Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Burkholderia Multivorans To Be Published.