Sodium in PDB 5qtf: T. Brucei Fpps in Complex with Cid 144539

The structure of T. Brucei Fpps in Complex with Cid 144539, PDB code: 5qtf was solved by L.Muenzker, J.K.Petrick, C.Schleberger, I.Cornaciu, J.A.Marquez, W.Jahnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	56.89 / 1.78
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	60.623, 60.623, 341.323, 90.00, 90.00, 120.00
R / Rfree (%)	25 / 29.3

The structure of T. Brucei Fpps in Complex with Cid 144539 also contains other interesting chemical elements:

Fluorine	(F)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Sodium atom in the T. Brucei Fpps in Complex with Cid 144539 (pdb code 5qtf). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the T. Brucei Fpps in Complex with Cid 144539, PDB code: 5qtf:

Sodium binding site 1 out of 1 in the T. Brucei Fpps in Complex with Cid 144539


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of T. Brucei Fpps in Complex with Cid 144539 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na403 b:50.2 occ:1.00 OE1 A:GLU93 2.5 43.1 1.0 N A:ARG50 2.8 42.0 1.0 NH1 A:ARG50 3.0 45.2 1.0 CB A:ARG50 3.1 34.5 1.0 CG A:ARG50 3.2 36.1 1.0 CD A:GLU93 3.3 40.4 1.0 OE2 A:GLU93 3.3 38.9 1.0 O A:HOH579 3.3 58.7 1.0 N A:ASN49 3.3 46.1 1.0 CA A:ARG50 3.5 43.0 1.0 CD A:ARG50 3.6 31.1 1.0 C A:TYR48 3.7 43.0 1.0 O A:HOH561 3.8 42.9 1.0 C A:ASN49 3.8 49.5 1.0 CA A:TYR48 3.8 43.9 1.0 CA A:ASN49 4.0 50.3 1.0 N A:GLY51 4.0 39.9 1.0 CZ A:ARG50 4.1 36.8 1.0 N A:TYR48 4.2 44.6 1.0 NE A:ARG50 4.3 29.0 1.0 C A:ARG50 4.3 43.5 1.0 O A:TYR48 4.4 40.6 1.0 CB A:ASN49 4.5 54.8 1.0 CG A:GLU93 4.7 38.1 1.0 O A:HOH591 4.8 65.3 1.0 O A:ASN49 5.0 47.7 1.0 O A:HOH584 5.0 48.7 1.0

L.Muenzker, L.Muenzker, J.K.Petrick, C.Schleberger, I.Cornaciu, J.A.Marquez, W.Jahnke. N/A N/A.