Sodium in PDB 5qtd: Unliganded T. Brucei Fpps

The structure of Unliganded T. Brucei Fpps, PDB code: 5qtd was solved by L.Muenzker, J.K.Petrick, C.Schleberger, I.Cornaciu, J.A.Marquez, W.Jahnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	56.68 / 1.64
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	60.453, 60.453, 340.066, 90.00, 90.00, 120.00
R / Rfree (%)	25 / 29.8

The binding sites of Sodium atom in the Unliganded T. Brucei Fpps (pdb code 5qtd). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Unliganded T. Brucei Fpps, PDB code: 5qtd:

Sodium binding site 1 out of 1 in the Unliganded T. Brucei Fpps


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Unliganded T. Brucei Fpps within 5.0Å range: probe atom residue distance (Å) B Occ A:Na402 b:44.2 occ:1.00 OE1 A:GLU93 2.7 37.5 1.0 NH1 A:ARG50 2.8 36.7 1.0 O A:HOH595 2.8 48.2 1.0 N A:ARG50 3.0 32.1 1.0 CG A:ARG50 3.3 38.2 1.0 N A:ASN49 3.3 41.8 1.0 OE2 A:GLU93 3.3 32.7 1.0 CB A:ARG50 3.3 28.8 1.0 CD A:GLU93 3.4 31.1 1.0 CD A:ARG50 3.6 28.8 1.0 O A:HOH590 3.7 36.4 1.0 C A:TYR48 3.7 36.4 1.0 CA A:ARG50 3.7 43.9 1.0 CA A:TYR48 3.9 34.4 1.0 CZ A:ARG50 3.9 32.4 1.0 C A:ASN49 4.0 49.0 1.0 N A:TYR48 4.1 38.9 1.0 CA A:ASN49 4.1 37.5 1.0 NE A:ARG50 4.2 28.8 1.0 O A:HOH593 4.2 52.0 1.0 N A:GLY51 4.3 32.5 1.0 CB A:ASN49 4.5 37.9 1.0 O A:TYR48 4.6 40.0 1.0 C A:ARG50 4.6 38.3 1.0 CG A:GLU93 4.8 28.5 1.0

L.Muenzker, L.Muenzker, J.K.Petrick, C.Schleberger, I.Cornaciu, J.A.Marquez, W.Jahnke. N/A N/A.