Sodium in PDB 5nt5: The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg)

The structure of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg), PDB code: 5nt5 was solved by H.I.Sbirkova, B.L.Shivachev, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.98 / 2.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	25.044, 41.534, 64.868, 90.00, 90.00, 90.00
R / Rfree (%)	24.5 / 31.2

The structure of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) also contains other interesting chemical elements:

Arsenic

(As)

1 atom

The binding sites of Sodium atom in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) (pdb code 5nt5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg), PDB code: 5nt5:

Sodium binding site 1 out of 1 in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na102 b:46.0 occ:1.00 OP2 A:DG2 2.2 40.1 1.0 P A:DG2 3.5 43.0 1.0 O5' A:DG2 3.7 39.2 1.0 C8 A:DG2 3.8 28.4 1.0 C2' A:DG2 4.0 33.2 1.0 C2' A:DC1 4.1 33.4 1.0 C7 A:DT3 4.2 34.0 1.0 O2 A:CAC101 4.2 0.7 1.0 O3' A:DC1 4.3 41.7 1.0 C3' A:DC1 4.5 35.9 1.0 N7 A:DG2 4.6 27.7 1.0 OP1 A:DG2 4.7 47.7 1.0 N9 A:DG2 4.7 30.3 1.0 C3' A:DG2 4.8 35.9 1.0 C5' A:DG2 4.9 37.1 1.0 C1' A:DG2 4.9 31.4 1.0

H.I.Sbirkova, B.L.Shivachev. The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) To Be Published.