Sodium in PDB 5ltl: Structure of Human Chemokine CCL16

The structure of Structure of Human Chemokine CCL16, PDB code: 5ltl was solved by O.H.Weiergraeber, R.Batra-Safferling, K.Haenel, D.Willbold, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.91 / 1.45
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	136.350, 24.590, 37.970, 90.00, 93.12, 90.00
R / Rfree (%)	17.1 / 19.8

The binding sites of Sodium atom in the Structure of Human Chemokine CCL16 (pdb code 5ltl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Human Chemokine CCL16, PDB code: 5ltl:

Sodium binding site 1 out of 1 in the Structure of Human Chemokine CCL16


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Human Chemokine CCL16 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:20.0 occ:1.00 O A:ILE65 2.4 21.4 1.0 O A:LEU70 2.4 20.4 1.0 O A:ASP67 2.4 21.8 1.0 O A:HOH227 2.5 23.3 1.0 O A:HOH231 2.5 28.6 1.0 O A:HOH209 2.6 20.7 1.0 C A:ASP67 3.4 21.3 1.0 C A:LEU70 3.4 19.5 1.0 C A:ILE65 3.5 20.5 1.0 C A:LYS66 3.9 21.6 1.0 N A:ASP67 4.0 20.9 1.0 CE1 A:TYR31 4.1 18.4 1.0 O A:HOH245 4.1 28.6 1.0 O A:LYS66 4.1 25.6 1.0 CA A:PRO68 4.2 27.9 1.0 N A:PRO68 4.2 24.8 1.0 N A:LEU70 4.2 20.2 1.0 CA A:LEU70 4.2 18.6 1.0 O A:HOH251 4.3 45.3 1.0 CA A:ASP67 4.3 18.4 1.0 N A:PRO71 4.4 19.6 1.0 N A:LYS66 4.4 19.0 1.0 CA A:ILE65 4.4 18.3 1.0 CA A:LYS66 4.4 22.5 1.0 CB A:LEU70 4.4 20.6 1.0 C A:PRO68 4.4 27.0 1.0 CA A:PRO71 4.4 18.1 1.0 O A:PRO68 4.5 28.4 1.0 OH A:TYR31 4.6 21.1 1.0 CZ A:TYR31 4.8 17.5 1.0 O A:TYR64 4.9 19.6 1.0 CD1 A:TYR31 4.9 16.2 1.0 C A:PRO71 4.9 20.8 1.0

O.H.Weiergraeber, D.Petrovic, A.Kislat, M.Pattky, J.Fabig, R.Batra-Safferling, K.Haenel, C.Huhn, B.Strodel, B.Homey, D.Willbold. Structure and Dynamics of Human Chemokine CCL16 To Be Published.