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Sodium in PDB 5l36: Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3

Protein crystallography data

The structure of Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3, PDB code: 5l36 was solved by W.Liu, J.B.Bonanno, S.C.Almo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.01 / 3.10
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 127.267, 127.267, 206.262, 90.00, 90.00, 120.00
R / Rfree (%) 17.8 / 22.3

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3 (pdb code 5l36). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3, PDB code: 5l36:

Sodium binding site 1 out of 1 in 5l36

Go back to Sodium Binding Sites List in 5l36
Sodium binding site 1 out of 1 in the Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Human Fasl Mutant in Complex with Human DCR3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na301

b:34.0
occ:1.00
ND1 B:HIS122 3.4 77.8 1.0
N B:ALA123 3.8 46.8 1.0
CE1 B:HIS122 3.9 73.4 1.0
CA B:HIS122 4.1 55.6 1.0
CG B:HIS122 4.3 69.8 1.0
C B:HIS122 4.5 51.5 1.0
CA B:ALA123 4.6 45.2 1.0
CB B:HIS122 4.8 64.9 1.0
O B:ALA121 4.9 49.1 1.0
NE2 B:HIS122 5.0 73.1 1.0

Reference:

W.Liu, U.Ramagopal, H.Cheng, J.B.Bonanno, R.Toro, R.Bhosle, C.Zhan, S.C.Almo. Crystal Structure of the Complex of Human Fasl and Its Decoy Receptor DCR3. Structure V. 24 2016 2016.
ISSN: ISSN 0969-2126
PubMed: 27806260
DOI: 10.1016/J.STR.2016.09.009
Page generated: Mon Oct 7 22:15:55 2024

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