Sodium in PDB 5em0: Crystal Structure of Mugwort Allergen Art V 4

The structure of Crystal Structure of Mugwort Allergen Art V 4, PDB code: 5em0 was solved by L.R.Offermann, M.L.Perdue, M.Chruszcz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.38 / 1.10
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.107, 59.180, 32.578, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 19

The binding sites of Sodium atom in the Crystal Structure of Mugwort Allergen Art V 4 (pdb code 5em0). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Mugwort Allergen Art V 4, PDB code: 5em0:

Sodium binding site 1 out of 1 in the Crystal Structure of Mugwort Allergen Art V 4


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mugwort Allergen Art V 4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:30.6 occ:1.00 O A:HOH465 2.2 39.5 1.0 O A:HOH332 2.3 33.5 1.0 O A:HOH328 2.3 28.2 1.0 O A:HOH404 2.5 28.3 1.0 O A:HOH487 2.7 35.1 1.0 OE2 A:GLU43 4.3 35.9 1.0 O A:ALA39 4.5 12.9 1.0 O A:PHE41 4.5 12.8 1.0 O A:HOH306 4.7 25.5 1.0 O A:SER40 4.8 11.6 1.0 O A:HOH434 5.0 15.3 0.5

L.R.Offermann, C.R.Schlachter, M.L.Perdue, K.A.Majorek, J.Z.He, W.T.Booth, J.Garrett, K.Kowal, M.Chruszcz. Structural, Functional, and Immunological Characterization of Profilin Panallergens Amb A 8, Art V 4, and Bet V 2. J.Biol.Chem. V. 291 15447 2016.
ISSN: ESSN 1083-351X
PubMed: 27231348
DOI: 10.1074/JBC.M116.733659