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Sodium in PDB 4x9k: Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae

Enzymatic activity of Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae

All present enzymatic activity of Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae:
2.3.1.180;

Protein crystallography data

The structure of Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae, PDB code: 4x9k was solved by J.Hou, Center For Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.61
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 85.459, 61.521, 69.676, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 17.6

Sodium Binding Sites:

The binding sites of Sodium atom in the Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae (pdb code 4x9k). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae, PDB code: 4x9k:

Sodium binding site 1 out of 1 in 4x9k

Go back to Sodium Binding Sites List in 4x9k
Sodium binding site 1 out of 1 in the Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Beta-Ketoacyl-Acyl Carrier Protein Synthase III-2 (FABH2)(C113A) From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na401

b:18.5
occ:1.00
O A:HOH728 2.4 22.2 1.0
O A:GLU244 2.4 16.8 1.0
O A:HOH769 2.4 32.2 1.0
OD2 A:ASP305 2.4 14.0 1.0
O A:HOH632 2.4 15.8 1.0
OD2 A:ASP246 2.6 13.1 1.0
CG A:ASP305 3.4 12.1 1.0
CG A:ASP246 3.4 13.8 1.0
C A:GLU244 3.5 16.8 1.0
OD1 A:ASP246 3.6 14.8 1.0
CB A:ASP305 3.6 11.4 1.0
O A:HOH788 3.7 30.0 1.0
N A:ASP305 4.0 11.0 1.0
O A:HOH793 4.0 29.6 1.0
CA A:GLU244 4.0 17.6 1.0
O A:HOH901 4.1 37.3 1.0
CB A:GLU244 4.2 19.7 1.0
O A:HOH660 4.3 31.8 1.0
CA A:ASP305 4.5 11.2 1.0
O A:HOH905 4.5 23.8 1.0
OD1 A:ASP305 4.5 12.0 1.0
O A:HOH881 4.6 39.5 1.0
N A:ILE245 4.6 15.0 1.0
N A:ASP246 4.7 13.2 1.0
CB A:ASP246 4.7 12.9 1.0
O A:HOH813 4.9 28.8 1.0
CA A:ILE245 4.9 14.7 1.0
C A:ASP304 4.9 11.4 1.0

Reference:

J.Hou, J.Hou, Center For Structural Genomics Of Infectious Diseases (Csgid). N/A N/A.
Page generated: Mon Oct 7 19:01:12 2024

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