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Sodium in PDB 4woa: Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment

Enzymatic activity of Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment

All present enzymatic activity of Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment:
3.2.1.17;

Protein crystallography data

The structure of Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment, PDB code: 4woa was solved by J.B.French, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.95 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.895, 77.895, 37.498, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 22.8

Sodium Binding Sites:

The binding sites of Sodium atom in the Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment (pdb code 4woa). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment, PDB code: 4woa:

Sodium binding site 1 out of 1 in 4woa

Go back to Sodium Binding Sites List in 4woa
Sodium binding site 1 out of 1 in the Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Lysozyme Multiple Crystals After Surface Acoustic Wave Alignment within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na201

b:19.5
occ:1.00
O A:HOH352 2.3 32.0 1.0
OE1 A:GLU35 2.4 17.9 1.0
O A:HOH380 2.5 22.6 1.0
O A:HOH312 2.5 25.4 1.0
O A:HOH320 2.7 20.8 1.0
CD A:GLU35 3.6 19.9 1.0
O A:HOH375 3.9 24.0 1.0
OE2 A:GLU35 4.2 23.2 1.0
O A:HOH398 4.4 25.0 1.0
O A:GLU35 4.5 16.5 1.0
CA A:GLU35 4.5 16.5 1.0
CG A:GLN57 4.6 17.9 1.0
O A:HOH418 4.7 34.0 1.0
OE1 A:GLN57 4.7 19.4 1.0
CG A:GLU35 4.7 18.2 1.0
CB A:GLN57 4.8 21.1 1.0
CB A:GLU35 4.8 18.6 1.0
OD2 A:ASP52 4.9 26.5 1.0
CB A:ALA110 4.9 16.4 1.0
O A:PHE34 4.9 16.8 1.0
O A:HOH376 5.0 25.0 1.0
C A:GLU35 5.0 16.9 1.0

Reference:

F.Guo, W.Zhou, P.Li, Z.Mao, N.H.Yennawar, J.B.French, T.J.Huang. Precise Manipulation and Patterning of Protein Crystals For Macromolecular Crystallography Using Surface Acoustic Waves. Small 2015.
ISSN: ESSN 1613-6829
PubMed: 25641793
DOI: 10.1002/SMLL.201403262
Page generated: Mon Oct 7 18:54:23 2024

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