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Sodium in PDB 4wmu: Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A

Protein crystallography data

The structure of Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A, PDB code: 4wmu was solved by M.C.Clifton, J.W.Faiman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.46 / 1.55
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 98.870, 135.900, 37.680, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 19

Other elements in 4wmu:

The structure of Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Chlorine (Cl) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A (pdb code 4wmu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A, PDB code: 4wmu:

Sodium binding site 1 out of 1 in 4wmu

Go back to Sodium Binding Sites List in 4wmu
Sodium binding site 1 out of 1 in the Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Mbp-MCL1 Bound to Ligand 2 at 1.55A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na418

b:23.3
occ:1.00
CG A:PRO-73 3.7 17.4 1.0
CB A:PRO-73 4.1 19.9 1.0
CB A:ASN-72 4.5 24.3 1.0
O A:HOH619 4.6 31.8 1.0
N A:ASN-72 4.8 15.6 1.0

Reference:

M.C.Clifton, D.M.Dranow, A.Leed, B.Fulroth, J.W.Fairman, J.Abendroth, K.A.Atkins, E.Wallace, D.Fan, G.Xu, Z.J.Ni, D.Daniels, J.Van Drie, G.Wei, A.B.Burgin, T.R.Golub, B.K.Hubbard, M.H.Serrano-Wu. A Maltose-Binding Protein Fusion Construct Yields A Robust Crystallography Platform For MCL1. Plos One V. 10 25010 2015.
ISSN: ESSN 1932-6203
PubMed: 25909780
DOI: 10.1371/JOURNAL.PONE.0125010
Page generated: Mon Oct 7 18:53:46 2024

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