Sodium in PDB 4v0v: The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660)

All present enzymatic activity of The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660):
3.1.3.16;

The structure of The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660), PDB code: 4v0v was solved by R.Chen, Y.Yan, A.C.Casado, D.Ron, R.J.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	51.263 / 1.61
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	66.800, 67.890, 156.380, 90.00, 90.00, 90.00
R / Rfree (%)	17.63 / 20.29

The structure of The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660) also contains other interesting chemical elements:

Manganese

(Mn)

2 atoms

The binding sites of Sodium atom in the The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660) (pdb code 4v0v). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660), PDB code: 4v0v:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660) within 5.0Å range: probe atom residue distance (Å) B Occ C:Na1301 b:19.9 occ:1.00 O C:HOH2062 3.0 29.1 1.0 OH C:TYR114 3.0 20.4 1.0 NZ C:LYS113 3.1 24.9 1.0 O C:HOH2198 3.2 41.1 1.0 O C:HOH2006 3.8 32.3 1.0 CE C:LYS113 3.9 19.3 1.0 CE1 C:TYR110 3.9 17.9 1.0 CZ C:TYR114 3.9 14.7 1.0 CD C:LYS113 3.9 17.5 1.0 CE2 C:TYR114 3.9 12.4 1.0 O C:PRO82 4.1 19.7 1.0 CD1 C:ILE13 4.2 28.7 1.0 CG2 C:ILE13 4.3 26.8 1.0 CD1 C:TYR110 4.7 12.4 1.0 OH C:TYR110 4.7 22.5 1.0 O C:HOH2085 4.8 15.4 1.0 CZ C:TYR110 4.8 18.3 1.0 CB C:ILE13 5.0 24.6 1.0

Sodium binding site 2 out of 2 in the The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of The Crystal Structure of Mouse PP1G in Complex with Truncated Human PPP1R15B (631-660) within 5.0Å range: probe atom residue distance (Å) B Occ D:Na1654 b:20.1 occ:1.00 N D:TYR651 3.1 23.9 1.0 O C:HOH2059 3.2 23.6 1.0 O D:HOH2004 3.3 41.0 1.0 CB D:TYR651 3.8 26.5 1.0 CA D:TYR650 3.8 22.7 1.0 O D:TYR651 3.9 26.4 1.0 CA D:TYR651 3.9 24.4 1.0 C D:TYR650 3.9 24.1 1.0 CD2 D:TYR651 4.2 30.1 1.0 CB D:TYR650 4.3 23.9 1.0 CG D:TYR651 4.3 28.4 1.0 C D:TYR651 4.4 23.3 1.0 O D:GLU649 4.9 26.1 1.0 CD1 D:TYR650 5.0 30.1 1.0

R.Chen, C.Rato, Y.Yan, A.Crespillo-Casado, H.J.Clarke, H.P.Harding, S.J.Marciniak, R.J.Read, D.Ron. G-Actin Provides Substrate-Specificity to Eukaryotic Initiation Factor 2ALPHA Holophosphatases. Elife V. 4 2015.
ISSN: ISSN 2050-084X
PubMed: 25774600
DOI: 10.7554/ELIFE.04871