Sodium in PDB 4qty: Caspase-3 E190A

All present enzymatic activity of Caspase-3 E190A:
3.4.22.56;

The structure of Caspase-3 E190A, PDB code: 4qty was solved by C.Cade, P.D.Swartz, S.H.Mackenzie, A.C.Clark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.11 / 1.60
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	69.215, 84.830, 96.349, 90.00, 90.00, 90.00
R / Rfree (%)	16.7 / 19.5

The binding sites of Sodium atom in the Caspase-3 E190A (pdb code 4qty). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Caspase-3 E190A, PDB code: 4qty:

Sodium binding site 1 out of 1 in the Caspase-3 E190A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Caspase-3 E190A within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:22.0 occ:1.00 OE1 A:GLN161 2.7 16.1 1.0 O A:TRP206 2.8 15.8 1.0 NE2 A:GLN261 3.0 17.8 1.0 N A:PHE215 3.0 13.7 1.0 CB A:PHE215 3.3 13.2 1.0 OG A:SER205 3.3 14.8 1.0 CD A:GLN161 3.4 15.8 1.0 N A:TRP214 3.5 13.8 1.0 NE2 A:GLN161 3.5 16.6 1.0 CB A:SER213 3.7 14.9 1.0 CA A:PHE215 3.7 13.7 1.0 C A:TRP206 3.9 14.2 1.0 CB A:TRP214 3.9 18.2 1.0 CD A:GLN261 3.9 16.1 1.0 OE1 A:GLN261 4.0 18.4 1.0 CA A:TRP214 4.0 15.0 1.0 N A:TRP206 4.0 13.9 1.0 C A:TRP214 4.0 13.8 1.0 C A:SER213 4.1 15.0 1.0 OG A:SER213 4.1 15.3 1.0 CB A:SER198 4.2 12.1 1.0 CA A:SER213 4.3 13.6 1.0 CA A:TRP206 4.4 14.7 1.0 OG A:SER198 4.6 15.5 1.0 CG A:TRP214 4.6 15.9 1.0 CG A:PHE215 4.6 14.8 1.0 CB A:SER205 4.6 14.8 1.0 C A:SER205 4.7 14.0 1.0 O A:SER198 4.8 15.0 1.0 N A:ILE216 4.8 14.0 1.0 CG A:GLN161 4.8 13.8 1.0 C A:PHE215 4.9 13.4 1.0 O A:SER213 4.9 13.7 1.0 CB A:TRP206 4.9 14.6 1.0 N A:ARG207 5.0 14.0 1.0

C.Cade, P.Swartz, S.H.Mackenzie, A.C.Clark. Modifying Caspase-3 Activity By Altering Allosteric Networks. Biochemistry 2014.
ISSN: ISSN 0006-2960
PubMed: 25343534
DOI: 10.1021/BI500874K