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Sodium in PDB 4p94: The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164)

Protein crystallography data

The structure of The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164), PDB code: 4p94 was solved by C.-L.Tsai, A.S.Arvai, J.P.Ishida, J.A.Tainer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.96 / 1.65
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 127.257, 127.257, 127.257, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 20

Sodium Binding Sites:

The binding sites of Sodium atom in the The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164) (pdb code 4p94). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164), PDB code: 4p94:

Sodium binding site 1 out of 1 in 4p94

Go back to Sodium Binding Sites List in 4p94
Sodium binding site 1 out of 1 in the The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of the Soluble Domain of Sulfolobus Acidocaldarius Flaf (Residues 35-164) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na201

b:37.6
occ:1.00
O A:HOH318 2.8 27.2 1.0
O A:HOH303 2.9 23.9 1.0
CE2 A:TYR141 3.7 29.9 1.0
CD2 A:TYR141 4.0 25.6 1.0
CG2 A:THR144 4.2 20.8 1.0
O A:HOH312 4.3 35.5 1.0
O A:PRO142 4.4 20.8 1.0
CZ A:TYR141 4.8 29.7 1.0
O A:ASN143 5.0 26.2 1.0

Reference:

A.Banerjee, C.L.Tsai, P.Chaudhury, P.Tripp, A.S.Arvai, J.P.Ishida, J.A.Tainer, S.V.Albers. Flaf Is A Beta-Sandwich Protein That Anchors the Archaellum in the Archaeal Cell Envelope By Binding the S-Layer Protein. Structure V. 23 863 2015.
ISSN: ISSN 0969-2126
PubMed: 25865246
DOI: 10.1016/J.STR.2015.03.001
Page generated: Mon Oct 7 17:39:03 2024

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