Sodium in PDB 4p3w: Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide

The structure of Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide, PDB code: 4p3w was solved by J.Seppala, U.Pentikainen, J.Ylanne, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.86 / 2.00
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	88.154, 88.154, 394.709, 90.00, 90.00, 120.00
R / Rfree (%)	20 / 22.6

The structure of Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide also contains other interesting chemical elements:

Praseodymium

(Pr)

4 atoms

The binding sites of Sodium atom in the Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide (pdb code 4p3w). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide, PDB code: 4p3w:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide within 5.0Å range: probe atom residue distance (Å) B Occ E:Na2402 b:50.8 occ:0.33 O E:HOH2511 2.4 47.6 1.0 OD1 E:ASP2173 3.0 44.1 1.0 O E:HOH2516 3.1 37.8 0.3 CG E:ASP2173 4.0 41.0 1.0 OD2 E:ASP2173 4.1 43.9 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide within 5.0Å range: probe atom residue distance (Å) B Occ C:Na2402 b:66.4 occ:0.33 O C:HOH2502 1.5 35.8 0.3 O C:HOH2511 2.4 57.4 1.0 OD1 C:ASP2173 3.1 63.1 1.0 CG C:ASP2173 4.0 60.4 1.0 OD2 C:ASP2173 4.3 63.9 1.0

J.Seppala, U.Pentikainen, J.Ylanne. Crystal Structure of the Human Filamin A Ig-Like Domains 20-21 in Complex with Migfilin Peptide To Be Published.