Sodium in PDB 4mxp: Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm

The structure of Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm, PDB code: 4mxp was solved by C.M.Del Campo, A.K.Mishra, Y.H.Wang, C.R.Roy, P.A.Janmey, D.G.Lambright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.90 / 1.83
Space group	I 41
Cell size a, b, c (Å), α, β, γ (°)	128.552, 128.552, 53.222, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 20.8

The binding sites of Sodium atom in the Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm (pdb code 4mxp). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm, PDB code: 4mxp:

Sodium binding site 1 out of 1 in the Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm within 5.0Å range: probe atom residue distance (Å) B Occ A:Na702 b:23.6 occ:1.00 O A:HIS543 2.3 19.2 1.0 O A:HOH979 2.4 20.8 1.0 O A:HOH980 2.4 25.9 1.0 OG1 A:THR546 2.5 19.9 1.0 O A:HOH978 2.5 22.4 1.0 O A:HOH981 2.6 31.8 1.0 C A:HIS543 3.5 21.2 1.0 CB A:THR546 3.5 20.2 1.0 N A:THR546 4.0 21.1 1.0 N A:HIS543 4.1 20.7 1.0 CA A:HIS543 4.3 20.3 1.0 O A:ARG544 4.3 21.7 1.0 CA A:THR546 4.4 21.3 1.0 O A:HOH881 4.4 27.8 1.0 C A:ARG544 4.4 23.1 1.0 O A:HOH854 4.4 31.9 1.0 N A:ARG544 4.5 21.4 1.0 CB A:HIS543 4.6 18.7 1.0 CA A:ARG544 4.6 23.5 1.0 CG2 A:THR546 4.6 19.6 1.0 NH2 A:ARG563 4.8 38.5 1.0 N A:TYR545 4.8 21.4 1.0

C.M.Del Campo, A.K.Mishra, Y.H.Wang, C.R.Roy, P.A.Janmey, D.G.Lambright. Structural Basis For Pi(4)P-Specific Membrane Recruitment of the Legionella Pneumophila Effector Drra/Sidm. Structure V. 22 397 2014.
ISSN: ISSN 0969-2126
PubMed: 24530282
DOI: 10.1016/J.STR.2013.12.018