Sodium in PDB 4ldk: Fad-Linked Sulfhydryl Oxidase Alr Mutation

All present enzymatic activity of Fad-Linked Sulfhydryl Oxidase Alr Mutation:
1.8.3.2;

The structure of Fad-Linked Sulfhydryl Oxidase Alr Mutation, PDB code: 4ldk was solved by M.Dong, S.Ramadan, C.Thorpe, B.Bahnson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.58 / 2.04
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	50.897, 77.770, 62.772, 90.00, 90.00, 90.00
R / Rfree (%)	19.5 / 26.7

The binding sites of Sodium atom in the Fad-Linked Sulfhydryl Oxidase Alr Mutation (pdb code 4ldk). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Fad-Linked Sulfhydryl Oxidase Alr Mutation, PDB code: 4ldk:

Sodium binding site 1 out of 1 in the Fad-Linked Sulfhydryl Oxidase Alr Mutation


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Fad-Linked Sulfhydryl Oxidase Alr Mutation within 5.0Å range: probe atom residue distance (Å) B Occ A:Na302 b:28.3 occ:1.00 OD1 A:ASN178 2.6 19.2 1.0 O2A A:FAD301 2.6 20.9 1.0 O2' A:FAD301 2.7 17.6 1.0 C2' A:FAD301 3.6 19.1 1.0 C3' A:FAD301 3.7 19.4 1.0 NE2 A:HIS174 3.7 21.4 1.0 CG A:ASN178 3.8 22.2 1.0 CG1 A:VAL177 3.8 15.3 1.0 N A:ASN178 3.8 18.5 1.0 CD2 A:HIS174 3.9 16.6 1.0 CD A:LYS183 3.9 29.3 1.0 CA A:ASN178 4.0 21.0 1.0 CD1 A:LEU181 4.0 23.5 1.0 PA A:FAD301 4.1 21.2 1.0 C A:VAL177 4.1 19.7 1.0 NE1 A:TRP107 4.1 13.1 1.0 CE A:LYS183 4.2 30.6 1.0 CB A:VAL177 4.3 19.4 1.0 O A:VAL177 4.4 20.7 1.0 O5' A:FAD301 4.4 24.8 1.0 O3' A:FAD301 4.5 23.1 1.0 O A:HOH416 4.5 25.8 1.0 CB A:ASN178 4.5 19.9 1.0 O A:HIS174 4.5 20.8 1.0 O4' A:FAD301 4.6 22.8 1.0 C4' A:FAD301 4.7 20.7 1.0 CE2 A:TRP107 4.8 13.8 1.0 ND2 A:ASN178 4.8 19.5 1.0 CA A:VAL177 4.8 18.7 1.0 O3P A:FAD301 4.9 24.4 1.0 O1A A:FAD301 4.9 19.9 1.0 CD1 A:TRP107 4.9 14.3 1.0 CZ2 A:TRP107 4.9 13.3 1.0

M.Dong, S.Ramadan, C.Thorpe, B.Bahnson. Fad-Linked Sulfhydryl Oxidase Alr Mutation To Be Published.