Sodium in PDB 4h2z: Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide

The structure of Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide, PDB code: 4h2z was solved by V.R.Samygina, B.Ochoa-Lizarralde, L.Malinina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.97 / 1.45
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	74.605, 49.998, 65.457, 90.00, 118.62, 90.00
R / Rfree (%)	16 / 20

The binding sites of Sodium atom in the Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide (pdb code 4h2z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide, PDB code: 4h2z:

Sodium binding site 1 out of 1 in the Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Human Gltp Bound with 12:0 Monosulfatide within 5.0Å range: probe atom residue distance (Å) B Occ A:Na304 b:23.1 occ:1.00 O A:HOH627 2.1 58.0 0.8 O A:HOH431 2.3 29.2 1.0 O A:HOH650 2.3 45.5 1.0 O A:HOH544 2.3 37.7 1.0 O A:HOH511 2.5 31.8 1.0 OE1 A:GLN109 4.5 20.1 1.0 OD2 A:ASP113 4.5 15.3 1.0 O A:HOH630 4.5 40.0 1.0 OD1 A:ASP113 4.6 15.4 1.0 CD A:GLN109 4.8 14.5 1.0 O A:HOH547 4.9 29.4 1.0 CG A:ASP113 5.0 14.9 1.0

V.R.Samygina, B.Ochoa-Lizarralde, A.N.Popov, A.Cabo-Bilbao, F.Goni-De-Cerio, J.G.Molotkovsky, D.J.Patel, R.E.Brown, L.Malinina. Structural Insights Into Lipid-Dependent Reversible Dimerization of Human Gltp. Acta Crystallogr.,Sect.D V. 69 603 2013.
ISSN: ISSN 0907-4449
PubMed: 23519669
DOI: 10.1107/S0907444913000024