Sodium in PDB 4h1t: X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution.

All present enzymatic activity of X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution.:
2.4.2.3;

The structure of X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution., PDB code: 4h1t was solved by I.I.Prokofev, A.A.Lashkov, A.G.Gabdoulkhakov, S.E.Sotnichenko, C.Betzel, A.M.Mikhailov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.27 / 1.92
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	63.691, 71.080, 87.937, 69.62, 72.56, 85.74
R / Rfree (%)	17.7 / 21.7

The structure of X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution. also contains other interesting chemical elements:

Potassium	(K)	1 atom
Chlorine	(Cl)	2 atoms

The binding sites of Sodium atom in the X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution. (pdb code 4h1t). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution., PDB code: 4h1t:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:3.9 occ:1.00 OE1 B:GLU48 2.6 8.0 1.0 OE2 A:GLU48 2.6 13.8 1.0 OG B:SER72 2.6 7.8 1.0 OG A:SER72 2.6 7.7 1.0 O B:ILE68 2.7 8.4 1.0 O A:ILE68 2.7 9.5 1.0 CB B:SER72 3.3 7.5 1.0 CB A:SER72 3.3 5.9 1.0 O A:HOH455 3.6 18.9 1.0 N A:ILE68 3.6 6.0 1.0 N B:ILE68 3.6 8.6 1.0 CD B:GLU48 3.7 10.6 1.0 C B:ILE68 3.7 5.9 1.0 C A:ILE68 3.7 10.1 1.0 CD A:GLU48 3.8 12.4 1.0 CA A:ILE68 4.2 10.9 1.0 CA B:ILE68 4.2 6.5 1.0 C A:GLY67 4.2 10.0 1.0 C B:GLY67 4.2 11.9 1.0 CA A:GLY67 4.3 11.6 1.0 CG B:GLU48 4.3 6.9 1.0 CA B:GLY67 4.3 6.2 1.0 CG A:GLU48 4.4 6.9 1.0 CA B:SER72 4.6 7.9 1.0 CA A:SER72 4.6 7.7 1.0 CB A:ILE68 4.7 7.9 1.0 O B:THR66 4.7 8.7 1.0 OE2 B:GLU48 4.7 10.2 1.0 CB B:ILE68 4.7 8.2 1.0 OE1 A:GLU48 4.7 9.9 1.0 O A:THR66 4.8 7.5 1.0 N B:SER72 4.8 4.2 1.0 N A:SER72 4.8 3.9 1.0 N B:GLY69 4.9 6.8 1.0 N A:GLY69 4.9 6.5 1.0 CB B:GLU48 5.0 4.7 1.0

Sodium binding site 2 out of 2 in the X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ E:Na301 b:3.4 occ:1.00 OE2 F:GLU48 2.6 10.8 1.0 OE2 E:GLU48 2.6 7.2 1.0 OG F:SER72 2.6 4.8 1.0 OG E:SER72 2.6 6.2 1.0 O F:ILE68 2.7 4.9 1.0 O E:ILE68 2.8 4.5 1.0 CB F:SER72 3.2 8.8 1.0 CB E:SER72 3.2 6.1 1.0 O F:HOH510 3.5 14.3 1.0 N E:ILE68 3.6 5.6 1.0 N F:ILE68 3.6 5.2 1.0 CD F:GLU48 3.7 7.6 1.0 C F:ILE68 3.7 5.8 1.0 CD E:GLU48 3.7 10.1 1.0 C E:ILE68 3.8 7.6 1.0 C E:GLY67 4.1 8.1 1.0 CA E:ILE68 4.2 10.8 1.0 CA F:ILE68 4.2 6.6 1.0 CA E:GLY67 4.2 6.3 1.0 C F:GLY67 4.2 6.7 1.0 CG F:GLU48 4.2 4.4 1.0 CG E:GLU48 4.3 9.5 1.0 CA F:GLY67 4.3 3.4 1.0 CA F:SER72 4.6 8.1 1.0 CA E:SER72 4.6 6.6 1.0 O E:THR66 4.6 5.7 1.0 CB E:ILE68 4.7 7.5 1.0 O F:THR66 4.7 4.7 1.0 CB F:ILE68 4.7 5.7 1.0 OE1 F:GLU48 4.7 9.7 1.0 OE1 E:GLU48 4.8 11.4 1.0 N F:SER72 4.8 7.4 1.0 N E:SER72 4.8 5.2 1.0 N F:GLY69 4.9 4.3 1.0 N E:GLY69 4.9 7.7 1.0 CB F:GLU48 5.0 6.2 1.0 CB E:GLU48 5.0 4.6 1.0

I.I.Prokofev, A.A.Lashkov, A.G.Gabdoulkhakov, S.E.Sotnichenko, C.Betzel, A.M.Mikhailov. X-Ray Structure of the Complex Vchuph with Phosphate Ion at 1.92A Resolution. To Be Published.