Atomistry » Sodium » PDB 4gxi-4hfb » 4h1p
Atomistry »
  Sodium »
    PDB 4gxi-4hfb »
      4h1p »

Sodium in PDB 4h1p: Use of Europium For Sad Phasing at the Cu K Alpha Wavelength

Enzymatic activity of Use of Europium For Sad Phasing at the Cu K Alpha Wavelength

All present enzymatic activity of Use of Europium For Sad Phasing at the Cu K Alpha Wavelength:
3.2.1.17;

Protein crystallography data

The structure of Use of Europium For Sad Phasing at the Cu K Alpha Wavelength, PDB code: 4h1p was solved by B.Vijayakumar, D.Velmurugan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.75 / 2.30
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.485, 77.485, 36.986, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 23.1

Other elements in 4h1p:

The structure of Use of Europium For Sad Phasing at the Cu K Alpha Wavelength also contains other interesting chemical elements:

Europium (Eu) 2 atoms
Chlorine (Cl) 14 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Use of Europium For Sad Phasing at the Cu K Alpha Wavelength (pdb code 4h1p). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Use of Europium For Sad Phasing at the Cu K Alpha Wavelength, PDB code: 4h1p:

Sodium binding site 1 out of 1 in 4h1p

Go back to Sodium Binding Sites List in 4h1p
Sodium binding site 1 out of 1 in the Use of Europium For Sad Phasing at the Cu K Alpha Wavelength


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Use of Europium For Sad Phasing at the Cu K Alpha Wavelength within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na217

b:32.9
occ:1.00
O A:SER60 2.7 22.5 1.0
O A:CYS64 2.7 21.8 1.0
O A:HOH396 2.7 31.4 1.0
O A:ARG73 2.7 31.3 1.0
OG A:SER72 2.8 29.9 1.0
O A:HOH324 2.9 20.9 1.0
C A:ARG73 3.4 28.0 1.0
CB A:SER72 3.5 30.1 1.0
C A:CYS64 3.5 24.2 1.0
C A:SER60 3.8 24.1 1.0
CA A:ASN65 3.8 21.8 1.0
N A:ARG73 3.9 32.1 1.0
N A:ASN65 4.0 20.2 1.0
N A:ASN74 4.1 25.2 1.0
C A:SER72 4.1 34.8 1.0
CA A:ASN74 4.2 26.4 1.0
CA A:ARG73 4.2 29.0 1.0
CA A:SER60 4.4 20.9 1.0
N A:CYS64 4.4 20.6 1.0
CB A:ASN74 4.4 21.6 1.0
CA A:SER72 4.4 33.9 1.0
O A:SER72 4.6 35.3 1.0
CA A:CYS64 4.6 19.7 1.0
C A:ARG61 4.6 29.5 1.0
CB A:ASN65 4.6 19.9 1.0
CB A:SER60 4.7 18.2 1.0
OD1 A:ASN65 4.7 21.5 1.0
N A:TRP62 4.7 24.9 1.0
O A:ARG61 4.7 34.8 1.0
CL A:CL212 4.7 32.7 1.0
O A:HOH378 4.7 30.0 1.0
N A:ASP66 4.8 18.9 1.0
N A:ARG61 4.8 25.3 1.0
C A:ASN65 4.9 20.3 1.0
CA A:ARG61 4.9 26.3 1.0
C A:TRP62 5.0 25.6 1.0

Reference:

B.Vijayakumar, D.Velmurugan. Use of Europium Ions For Sad Phasing of Lysozyme at the Cu Kalpha Wavelength Acta Crystallogr.,Sect.F V. 69 20 2013.
ISSN: ESSN 1744-3091
PubMed: 23295480
DOI: 10.1107/S1744309112047562
Page generated: Tue Dec 15 06:42:35 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy